RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 BATFQ16520 125 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 Q6ZVU0 165 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 Q8N402 240 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 CMKLR1Q99788 373 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 PTBP2Q9UKA9 531 aaKnown RBP14.92□□□□□ -0.02
CHD4-210ENST00000544040 CCDC85CA6NKD9 419 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 MMP20O60882 483 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 AGXTP21549 392 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 BLKP51451 505 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 PCLAFQ15004 111 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 KREMEN2Q8NCW0 462 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 KCNK6Q9Y257 313 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 CAPN14A8MX76 684 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 AOC1P19801 751 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 LSSP48449 732 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 SNRPD2P62316 118 aaKnown RBP14.92□□□□□ -0.02
CHD4-210ENST00000544040 ZNF616Q08AN1 781 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 GINS1Q14691 196 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 GPR157Q5UAW9 335 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 PTF1AQ7RTS3 328 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 ZDHHC4Q9NPG8 344 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 ATXN7L1Q9ULK2 861 aaPredicted RBP14.92□□□□□ -0.02
CHD4-210ENST00000544040 HCN4Q9Y3Q4 1203 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 TNFP01375 233 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 HTR2BP41595 481 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 DEFB115Q30KQ5 88 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 GPR33Q49SQ1 333 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 MBLAC2Q68D91 279 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 CEACAM19Q7Z692 300 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 LRRTM4Q86VH4 590 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 TMEM121BQ9BXQ6 578 aaPredicted RBP14.91□□□□□ -0.02
CHD4-210ENST00000544040 RFPL1O75677 317 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 H2AFB2P0C5Z0 115 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 ERP29P30040 261 aaKnown RBP14.91□□□□□ -0.02
CHD4-210ENST00000544040 SNIP1Q8TAD8 396 aaKnown RBP14.91□□□□□ -0.02
CHD4-210ENST00000544040 RAD9AQ99638 391 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 ARVCFO00192 962 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 IRAK2O43187 625 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 RPS2P15880 293 aaKnown RBP14.91□□□□□ -0.02
CHD4-210ENST00000544040 PCSK2P16519 638 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 PTCHD3Q3KNS1 767 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 CFAP77Q6ZQR2 320 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 LINC00471Q8N535 108 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 PNPLA2Q96AD5 504 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 SCRN2Q96FV2 425 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 TUBA1CQ9BQE3 449 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 ARL6Q9H0F7 186 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 SYT4Q9H2B2 425 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 PPIL3Q9H2H8 161 aaKnown RBP14.91□□□□□ -0.02
CHD4-210ENST00000544040 COL5A2P05997 1499 aaPredicted RBP14.91□□□□□ -0.02
CHD4-210ENST00000544040 RPL26P61254 145 aaKnown RBP14.91□□□□□ -0.02
CHD4-210ENST00000544040 KANK2Q63ZY3 851 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 FBXL22Q6P050 247 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 FAM86B1Q8N7N1 296 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 OR56A1Q8NGH5 318 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 ABHD5Q8WTS1 349 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 ZNF516Q92618 1163 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 P2RY13Q9BPV8 354 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 USP32Q8NFA0 1604 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.91□□□□□ -0.02
CHD4-210ENST00000544040 RBM47A0AV96 593 aaKnown RBP14.91□□□□□ -0.02
CHD4-210ENST00000544040 GKN3PP0CG01 181 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 ACRP10323 421 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 DCKP27707 260 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 ACVR1BP36896 505 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 TXNDC8Q6A555 127 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 TATDN1Q6P1N9 297 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 DNAAF1Q8NEP3 725 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 SARDHQ9UL12 918 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 TMED5Q9Y3A6 229 aa14.91□□□□□ -0.02
CHD4-210ENST00000544040 CDC123O75794 336 aaPredicted RBP14.9□□□□□ -0.02
CHD4-210ENST00000544040 POP7O75817 140 aaKnown RBP14.9□□□□□ -0.02
CHD4-210ENST00000544040 RPL35P42766 123 aaKnown RBP14.9□□□□□ -0.02
CHD4-210ENST00000544040 RAB4BP61018 213 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 WDR20Q8TBZ3 569 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 SLC5A11Q8WWX8 675 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 RDH12Q96NR8 316 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 OR5B12Q96R08 314 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 C1orf21Q9H246 121 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 CD93Q9NPY3 652 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 PAK1IP1Q9NWT1 392 aaPredicted RBP14.9□□□□□ -0.02
CHD4-210ENST00000544040 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 EEF1E1-BLOC1S5C9J1V9 151 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 TNFSF12O43508 249 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 RBBP9O75884 186 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 AKR1C4P17516 323 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 HTR2AP28223 471 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 HADHBP55084 474 aaKnown RBP14.9□□□□□ -0.02
CHD4-210ENST00000544040 ZNF45Q02386 682 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 LHFPL3Q86UP9 236 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 XPNPEP1Q9NQW7 623 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 SEC14L4Q9UDX3 406 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 A0A1W2PQ45 241 aaPredicted RBP14.9□□□□□ -0.02
CHD4-210ENST00000544040 A0A1W2PQY0 241 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 ARSFP54793 590 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 MFSD13AQ14CX5 517 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 ZNF367Q7RTV3 350 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 C7orf61Q8IZ16 206 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 KRTCAP2Q8N6L1 136 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 NIPA2Q8N8Q9 360 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms