RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 ADPRHL1Q8NDY3 354 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 RLN3Q8WXF3 142 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 HSFY1Q96LI6 401 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 TRMOQ9BU70 441 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.57□□□□□ -1.04
VPS13D-212ENST00000543766 SLC25A18Q9H1K4 315 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 TREM2Q9NZC2 230 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 CLEC2DQ9UHP7 191 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 HIF3AQ9Y2N7 669 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 SPATA31A1Q5TZJ5 1347 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 FAM205AQ6ZU69 1335 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 ZNFX1Q9P2E3 1918 aaKnown RBP8.56□□□□□ -1.04
VPS13D-212ENST00000543766 CXCL11O14625 94 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 DCXO43602 365 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 NUDT21O43809 227 aaKnown RBP8.56□□□□□ -1.04
VPS13D-212ENST00000543766 SLC22A5O76082 557 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 TMEM253P0C7T8 217 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 IFNGR1P15260 489 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 CYP2F1P24903 491 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 NDUFS1P28331 727 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 ADSSP30520 456 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 GNA15P30679 374 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 FDFT1P37268 417 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 ANXA11P50995 505 aaKnown RBP8.56□□□□□ -1.04
VPS13D-212ENST00000543766 ATP5J2P56134 94 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 TNFRSF9Q07011 255 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 CCNIQ14094 377 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 DGCR6Q14129 220 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 C2orf76Q3KRA6 126 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 ACTBL2Q562R1 376 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 RRM2BQ7LG56 351 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 LNX1Q8TBB1 728 aaPredicted RBP8.56□□□□□ -1.04
VPS13D-212ENST00000543766 SLC35G2Q8TBE7 412 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 SLAMF9Q96A28 289 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 MRGPRX4Q96LA9 322 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 MTG1Q9BT17 334 aaPredicted RBP8.56□□□□□ -1.04
VPS13D-212ENST00000543766 C1QTNF6Q9BXI9 259 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 SIX2Q9NPC8 291 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 NMRK2Q9NPI5 230 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 FBXO34Q9NWN3 711 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 HEY2Q9UBP5 337 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 GPR160Q9UJ42 338 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 NUBP2Q9Y5Y2 271 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 PCNTO95613 3336 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 A0A0B4J293 547 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 ANKRD61A6NGH8 418 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 ADAMDEC1O15204 470 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 RAF1P04049 648 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 C8BP07358 591 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 AKR1A1P14550 325 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 PRDX6P30041 224 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 NPY4RP50391 375 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 MAXP61244 160 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 HERV-K104P63124 156 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 DHODHQ02127 395 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 CELF3Q5SZQ8 465 aaKnown RBP8.56□□□□□ -1.04
VPS13D-212ENST00000543766 DESI1Q6ICB0 168 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 KIAA1211LQ6NV74 962 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 TTLL10Q6ZVT0 673 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 SAMD7Q7Z3H4 446 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 ZNF34Q8IZ26 560 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 LCORLQ8N3X6 602 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 SPATA6LQ8N4H0 392 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 OR4C6Q8NH72 309 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 HM13Q8TCT9 377 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 CD244Q9BZW8 370 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 KCNK12Q9HB15 430 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 RGS18Q9NS28 235 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 RAPGEFL1Q9UHV5 662 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 PPP1R3CQ9UQK1 317 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 LIPT1Q9Y234 373 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 B3GNT3Q9Y2A9 372 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 ZNF891A8MT65 544 aaPredicted RBP8.56□□□□□ -1.04
VPS13D-212ENST00000543766 C1orf196B1AJZ1 125 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 LRRN3E7EW58 273 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 F5H0A9 414 aaPredicted RBP8.56□□□□□ -1.04
VPS13D-212ENST00000543766 ZNF701M0R085 212 aaPredicted RBP8.56□□□□□ -1.04
VPS13D-212ENST00000543766 RGS9O75916 674 aaPredicted RBP8.56□□□□□ -1.04
VPS13D-212ENST00000543766 HEXAP06865 529 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 H2AFZP0C0S5 128 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 GIMD1P0DJR0 217 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 ELNP15502 786 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 IGFALSP35858 605 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 ID1P41134 155 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 CAPZBP47756 277 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 NUTF2P61970 127 aaKnown RBP8.56□□□□□ -1.04
VPS13D-212ENST00000543766 RPS6P62753 249 aaKnown RBP8.56□□□□□ -1.04
VPS13D-212ENST00000543766 VLDLRP98155 873 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 ZNF616Q08AN1 781 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 BIKQ13323 160 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 TNFAIP1Q13829 316 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 CCNJQ5T5M9 372 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 ZNF836Q6ZNA1 936 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 LRRC69Q6ZNQ3 347 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 H2AFVQ71UI9 128 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 MISPQ8IVT2 679 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 NRMQ8IXM6 262 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 SVOPLQ8N434 492 aa8.56□□□□□ -1.04
VPS13D-212ENST00000543766 RBM15BQ8NDT2 890 aaKnown RBP8.56□□□□□ -1.04
VPS13D-212ENST00000543766 ZCCHC10Q8TBK6 192 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms