RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 MFAP5Q13361 173 aa18.87■□□□□ 0.61
CACNA2D4-215ENST00000542340 RCN2Q14257 317 aa18.87■□□□□ 0.61
CACNA2D4-215ENST00000542340 EXT1Q16394 746 aa18.87■□□□□ 0.61
CACNA2D4-215ENST00000542340 CPSF6Q16630 551 aaKnown RBP eCLIP18.87■□□□□ 0.61
CACNA2D4-215ENST00000542340 WDR93Q6P2C0 686 aa18.87■□□□□ 0.61
CACNA2D4-215ENST00000542340 OR52B6Q8NGF0 335 aa18.87■□□□□ 0.61
CACNA2D4-215ENST00000542340 BRIX1Q8TDN6 353 aaKnown RBP18.87■□□□□ 0.61
CACNA2D4-215ENST00000542340 LPAR4Q99677 370 aa18.87■□□□□ 0.61
CACNA2D4-215ENST00000542340 ZBTB26Q9HCK0 441 aa18.87■□□□□ 0.61
CACNA2D4-215ENST00000542340 PSD3Q9NYI0 1048 aa18.87■□□□□ 0.61
CACNA2D4-215ENST00000542340 BAHCC1Q9P281 2608 aa18.87■□□□□ 0.61
CACNA2D4-215ENST00000542340 DCDC2Q9UHG0 476 aa18.87■□□□□ 0.61
CACNA2D4-215ENST00000542340 DAPP1Q9UN19 280 aa18.87■□□□□ 0.61
CACNA2D4-215ENST00000542340 IGKV3D-11A0A0A0MRZ8 115 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 A0A1W2PPM1 405 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 TTLL8A6PVC2 850 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 CLDN4O14493 209 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 CELA2AP08217 269 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 ATP5A1P25705 553 aaKnown RBP18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 PTX3P26022 381 aaPredicted RBP18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 CERS1P27544 350 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 SOX11P35716 441 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 TSFMP43897 325 aaKnown RBP18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 SLCO1A2P46721 670 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 CCNG1P51959 295 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 ARFIP1P53367 373 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 LIM2P55344 173 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 HSD17B7P56937 341 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 PHEXP78562 749 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 DDX39BQ13838 428 aaKnown RBP18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 ZRSR2Q15696 482 aaKnown RBP18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 AP5B1Q2VPB7 878 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 BTBD16Q32M84 506 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 PLEKHN1Q494U1 663 aaPredicted RBP18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 PAPD4Q6PIY7 484 aaKnown RBP18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 Q6ZS92 163 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 ACOT4Q8N9L9 421 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 Q8NA96 180 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 ARMC2Q8NEN0 867 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 WDR20Q8TBZ3 569 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 M1APQ8TC57 530 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 PPP4R1Q8TF05 950 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 ZNF483Q8TF39 744 aaPredicted RBP18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 NSUN5Q96P11 429 aaKnown RBP18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 CDK15Q96Q40 435 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 MTERF1Q99551 399 aaKnown RBP18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 CENPKQ9BS16 269 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 OR51B5Q9H339 312 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 LYRM4Q9HD34 91 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 SLAMF7Q9NQ25 335 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 DMRT3Q9NQL9 472 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 PTGFRNQ9P2B2 879 aa18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 MRPS33Q9Y291 106 aaKnown RBP18.86■□□□□ 0.61
CACNA2D4-215ENST00000542340 TCRBV16S1A1N1A0A5B0 115 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 FOXE1O00358 373 aaPredicted RBP18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 CYR61O00622 381 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 CDH16O75309 829 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 SCELO95171 688 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 WISP1O95388 367 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 ITGAMP11215 1152 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 MAOAP21397 527 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 HIST1H1TP22492 207 aaPredicted RBP18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 ARL1P40616 181 aaPredicted RBP18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 MLLT10P55197 1068 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 HERVK_113P63132 956 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 FOXK1P85037 733 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 TRAF3Q13114 568 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 OR4C11Q6IEV9 310 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 EMBQ6PCB8 327 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 ZNF793Q6ZN11 406 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 LINC00696Q6ZRV3 163 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 SH2D5Q6ZV89 423 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 SCUBE1Q8IWY4 988 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 ZNF595Q8IYB9 648 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 RNF175Q8N4F7 328 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 SIRT6Q8N6T7 355 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 RGMAQ96B86 450 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 MAGEB10Q96LZ2 347 aaPredicted RBP18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 ERVK-6Q9BXR3 956 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 SEMA4BQ9NPR2 832 aaPredicted RBP18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 NECTIN3Q9NQS3 549 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 KCMF1Q9P0J7 381 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 PPT2Q9UMR5 302 aa18.85■□□□□ 0.61
CACNA2D4-215ENST00000542340 PYCARD-AS1I3L0S3 204 aa18.84■□□□□ 0.61
CACNA2D4-215ENST00000542340 SAP18O00422 153 aaKnown RBP18.84■□□□□ 0.61
CACNA2D4-215ENST00000542340 RTCAO00442 366 aaKnown RBP18.84■□□□□ 0.61
CACNA2D4-215ENST00000542340 DLX3O60479 287 aa18.84■□□□□ 0.61
CACNA2D4-215ENST00000542340 SH3BGRLO75368 114 aa18.84■□□□□ 0.61
CACNA2D4-215ENST00000542340 OTCP00480 354 aa18.84■□□□□ 0.61
CACNA2D4-215ENST00000542340 KRT15P19012 456 aa18.84■□□□□ 0.61
CACNA2D4-215ENST00000542340 ATP5F1P24539 256 aaPredicted RBP18.84■□□□□ 0.61
CACNA2D4-215ENST00000542340 RPS13P62277 151 aaKnown RBP18.84■□□□□ 0.61
CACNA2D4-215ENST00000542340 CUL3Q13618 768 aa18.84■□□□□ 0.61
CACNA2D4-215ENST00000542340 GGTA1PQ4G0N0 100 aa18.84■□□□□ 0.61
CACNA2D4-215ENST00000542340 C10orf62Q5T681 223 aaPredicted RBP18.84■□□□□ 0.61
CACNA2D4-215ENST00000542340 MILR1Q7Z6M3 343 aa18.84■□□□□ 0.61
CACNA2D4-215ENST00000542340 CYP4X1Q8N118 509 aa18.84■□□□□ 0.61
CACNA2D4-215ENST00000542340 AMER2Q8N7J2 671 aa18.84■□□□□ 0.61
CACNA2D4-215ENST00000542340 DNAJB14Q8TBM8 379 aa18.84■□□□□ 0.61
CACNA2D4-215ENST00000542340 EPS8L3Q8TE67 593 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms