RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 OCM2P0CE71 109 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 OCMP0CE72 109 aaPredicted RBP8.27□□□□□ -1.08
THBS3-210ENST00000541576 COX7A2P14406 83 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 ME2P23368 584 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 HPCAL1P37235 193 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 KIR3DL1P43629 444 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 EMP3P54852 163 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 C21orf58P58505 322 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 BNC1Q01954 994 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 SRSF11Q05519 484 aaKnown RBP8.27□□□□□ -1.08
THBS3-210ENST00000541576 BNIP3Q12983 259 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 C14orf28Q4W4Y0 310 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 CCDC92Q53HC0 331 aaPredicted RBP8.27□□□□□ -1.08
THBS3-210ENST00000541576 RABL3Q5HYI8 236 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 C6orf10Q5SRN2 563 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 TMEM214Q6NUQ4 689 aaKnown RBP8.27□□□□□ -1.08
THBS3-210ENST00000541576 FIGLAQ6QHK4 219 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 PAGE2Q7Z2X7 111 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 SNX29P2Q8IUI4 249 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 OR7A2PQ8NGA2 310 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 GTF2H4Q92759 462 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 ZUFSPQ96AP4 578 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 RGMAQ96B86 450 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 CIB1Q99828 191 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 ANKMY1Q9P2S6 941 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 CDC14AQ9UNH5 594 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 BTBD3Q9Y2F9 522 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 CSNK1G3Q9Y6M4 447 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 A0A0J9YY10 115 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 LRIT2A6NDA9 550 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 LILRA5A6NI73 299 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 RTCAO00442 366 aaKnown RBP8.27□□□□□ -1.09
THBS3-210ENST00000541576 ACOT8O14734 319 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 SCAMP2O15127 329 aaKnown RBP8.27□□□□□ -1.09
THBS3-210ENST00000541576 STATHP02808 62 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 ZIC1Q15915 447 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 UGT8Q16880 541 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 TMEM35AQ53FP2 167 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 CCNYL2Q5T2Q4 361 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 ANKRD26P1Q6NSI1 321 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 NANOGP8Q6NSW7 305 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 TMEM53Q6P2H8 277 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 ZNF438Q7Z4V0 828 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 GPR180Q86V85 440 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 NUDT13Q86X67 352 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 TMEM132CQ8N3T6 1108 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 FNDC8Q8TC99 324 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 TMEM125Q96AQ2 219 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 PPM1MQ96MI6 270 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 QRFPRQ96P65 431 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 MACROD1Q9BQ69 325 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 ZNF717Q9BY31 904 aaPredicted RBP8.27□□□□□ -1.09
THBS3-210ENST00000541576 KLHL25Q9H0H3 589 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 PCDHAC1Q9H158 963 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 RMND5AQ9H871 391 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 NANOGQ9H9S0 305 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 EVA1BQ9NVM1 165 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 ABCD2Q9UBJ2 740 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 EXO1Q9UQ84 846 aaKnown RBP8.27□□□□□ -1.09
THBS3-210ENST00000541576 NEUROG3Q9Y4Z2 214 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 PCDHA9Q9Y5H5 950 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 VPS13AQ96RL7 3174 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 TNRC6BQ9UPQ9 1833 aaKnown RBP8.27□□□□□ -1.09
THBS3-210ENST00000541576 TRIM38O00635 465 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 KCNH1O95259 989 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 PVRP15151 417 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 CKMT2P17540 419 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 CDH2P19022 906 aaPredicted RBP8.27□□□□□ -1.09
THBS3-210ENST00000541576 CNR2P34972 360 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 BSGP35613 385 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 LSSP48449 732 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 PLA2G16P53816 162 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 PPP1CAP62136 330 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 PWP1Q13610 501 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 SAMD4BQ5PRF9 694 aaKnown RBP8.27□□□□□ -1.09
THBS3-210ENST00000541576 PERM1Q5SV97 790 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 C6orf132Q5T0Z8 1188 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 GPR107Q5VW38 600 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 FCRL6Q6DN72 434 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 DNAJC14Q6Y2X3 702 aaPredicted RBP8.27□□□□□ -1.09
THBS3-210ENST00000541576 SLC25A45Q8N413 288 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 SMYD1Q8NB12 490 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.27□□□□□ -1.09
THBS3-210ENST00000541576 C16orf78Q8WTQ4 265 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 TMEM131Q92545 1883 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 ZC3H10Q96K80 434 aaKnown RBP8.27□□□□□ -1.09
THBS3-210ENST00000541576 FCRL4Q96PJ5 515 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 AICDAQ9GZX7 198 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 MYNNQ9NPC7 610 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 SERHLQ9NQF3 203 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 SLC6A13Q9NSD5 602 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 POMT2Q9UKY4 750 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 ERVK-11Q9UQG0 969 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 KLK4Q9Y5K2 254 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 V9GYQ6 96 aa8.27□□□□□ -1.09
THBS3-210ENST00000541576 SAC3D1A6NKF1 404 aa8.26□□□□□ -1.09
THBS3-210ENST00000541576 CAPN5O15484 640 aaPredicted RBP8.26□□□□□ -1.09
THBS3-210ENST00000541576 DFNA5O60443 496 aa8.26□□□□□ -1.09
THBS3-210ENST00000541576 ZBTB11O95625 1053 aaPredicted RBP8.26□□□□□ -1.09
THBS3-210ENST00000541576 YAP1P46937 504 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms