RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 ZNF285Q96NJ3 590 aa5.47□□□□□ -1.53
CDKN3-206ENST00000541304 PRAP1Q96NZ9 151 aa5.47□□□□□ -1.53
CDKN3-206ENST00000541304 KCNC2Q96PR1 638 aa5.47□□□□□ -1.53
CDKN3-206ENST00000541304 TRAPPC9Q96Q05 1148 aa5.47□□□□□ -1.53
CDKN3-206ENST00000541304 TEFMQ96QE5 360 aaKnown RBP5.47□□□□□ -1.53
CDKN3-206ENST00000541304 CMKLR1Q99788 373 aa5.47□□□□□ -1.53
CDKN3-206ENST00000541304 C17orf62Q9BQA9 187 aa5.47□□□□□ -1.53
CDKN3-206ENST00000541304 ACAT2Q9BWD1 397 aa5.47□□□□□ -1.53
CDKN3-206ENST00000541304 SLC6A20Q9NP91 592 aa5.47□□□□□ -1.53
CDKN3-206ENST00000541304 PARD6AQ9NPB6 346 aa5.47□□□□□ -1.53
CDKN3-206ENST00000541304 DMRT3Q9NQL9 472 aa5.47□□□□□ -1.53
CDKN3-206ENST00000541304 FSCN3Q9NQT6 498 aa5.47□□□□□ -1.53
CDKN3-206ENST00000541304 FGFR1OP2Q9NVK5 253 aa5.47□□□□□ -1.53
CDKN3-206ENST00000541304 FAM86C1Q9NVL1 165 aa5.47□□□□□ -1.53
CDKN3-206ENST00000541304 SOHLH2Q9NX45 425 aa5.47□□□□□ -1.53
CDKN3-206ENST00000541304 SPHK1Q9NYA1 384 aa5.47□□□□□ -1.53
CDKN3-206ENST00000541304 VPS29Q9UBQ0 182 aa5.47□□□□□ -1.53
CDKN3-206ENST00000541304 ZDHHC2Q9UIJ5 367 aa5.47□□□□□ -1.53
CDKN3-206ENST00000541304 ZNF490Q9ULM2 529 aaPredicted RBP5.47□□□□□ -1.53
CDKN3-206ENST00000541304 RUVBL1Q9Y265 456 aaKnown RBP5.47□□□□□ -1.53
CDKN3-206ENST00000541304 ARL2BPQ9Y2Y0 163 aa5.47□□□□□ -1.53
CDKN3-206ENST00000541304 ASB1Q9Y576 335 aa5.47□□□□□ -1.53
CDKN3-206ENST00000541304 SLC22A7Q9Y694 548 aa5.47□□□□□ -1.53
CDKN3-206ENST00000541304 VCANP13611 3396 aa5.47□□□□□ -1.53
CDKN3-206ENST00000541304 ZFC3H1O60293 1989 aaKnown RBP5.46□□□□□ -1.54
CDKN3-206ENST00000541304 IGKV1-8A0A0C4DH67 115 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 A0A1W2PQM1 296 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 ARHGAP10A1A4S6 786 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 LRRC14BA6NHZ5 514 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 NPIPB6E9PJ23 425 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 UBFD1O14562 309 aaKnown RBP5.46□□□□□ -1.54
CDKN3-206ENST00000541304 SLC30A4O14863 429 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 HAT1O14929 419 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 PIP5K1BO14986 540 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 B4GAT1O43505 415 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 ITM2AO43736 263 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 OR1F1O43749 312 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 SH3BP5O60239 455 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 SNX3O60493 162 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 LYPLA1O75608 230 aaPredicted RBP5.46□□□□□ -1.54
CDKN3-206ENST00000541304 SCELO95171 688 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 CYC1P08574 325 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 CD63P08962 238 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 PRPS2P11908 318 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 PCNAP12004 261 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 ST6GAL1P15907 406 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 LBPP18428 481 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 CD22P20273 847 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 IL10P22301 178 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 PSMB5P28074 263 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 CSF2RBP32927 897 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 CSTF2P33240 577 aaKnown RBP eCLIP5.46□□□□□ -1.54
CDKN3-206ENST00000541304 ASMTP46597 345 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 ATP4BP51164 291 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 RAP1GDS1P52306 607 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 ARFIP2P53365 341 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 CLNS1AP54105 237 aaKnown RBP5.46□□□□□ -1.54
CDKN3-206ENST00000541304 AQP5P55064 265 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 OR1D5P58170 312 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 STX1BP61266 288 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 ERVK-8P63133 956 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 CHRNEQ04844 493 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 ZFP36L1Q07352 338 aaKnown RBP5.46□□□□□ -1.54
CDKN3-206ENST00000541304 ACSM2AQ08AH3 577 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 LRRC74AQ0VAA2 488 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 FAM53BQ14153 422 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 RBBP5Q15291 538 aaKnown RBP5.46□□□□□ -1.54
CDKN3-206ENST00000541304 MAPRE2Q15555 327 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 TRIP6Q15654 476 aaKnown RBP5.46□□□□□ -1.54
CDKN3-206ENST00000541304 MUM1Q2TAK8 710 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 FAM214AQ32MH5 1076 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 C18orf21Q32NC0 220 aaPredicted RBP5.46□□□□□ -1.54
CDKN3-206ENST00000541304 UGT3A2Q3SY77 523 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 AMZ1Q400G9 498 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 CATSPEREQ5SY80 951 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 KHDRBS2Q5VWX1 349 aaKnown RBP5.46□□□□□ -1.54
CDKN3-206ENST00000541304 KIAA1614Q5VZ46 1190 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 ACSM2BQ68CK6 577 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 PRMT9Q6P2P2 845 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 EPGNQ6UW88 154 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 ATG14Q6ZNE5 492 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 LCNL1Q6ZST4 164 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 REC114Q7Z4M0 266 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 TMPRSS12Q86WS5 348 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 NUDT13Q86X67 352 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 ZFAND4Q86XD8 727 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 SLITRK4Q8IW52 837 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.46□□□□□ -1.54
CDKN3-206ENST00000541304 SAMD14Q8IZD0 417 aaPredicted RBP5.46□□□□□ -1.54
CDKN3-206ENST00000541304 CACNA2D3Q8IZS8 1091 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 ABCA7Q8IZY2 2146 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 OR2L5Q8NG80 312 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 HUS1BQ8NHY5 278 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 BCAS4Q8TDM0 211 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 ZNF473Q8WTR7 871 aaKnown RBP5.46□□□□□ -1.54
CDKN3-206ENST00000541304 SLC13A3Q8WWT9 602 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 TUBGCP3Q96CW5 907 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 ZNF764Q96H86 408 aaPredicted RBP5.46□□□□□ -1.54
CDKN3-206ENST00000541304 TGM7Q96PF1 710 aa5.46□□□□□ -1.54
CDKN3-206ENST00000541304 OR2A5Q96R48 311 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms