RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 TRIM46Q7Z4K8 759 aa17.73■□□□□ 0.43
VPS33A-205ENST00000541169 CUZD1Q86UP6 607 aa17.73■□□□□ 0.43
VPS33A-205ENST00000541169 ZC3H7AQ8IWR0 971 aaKnown RBP17.73■□□□□ 0.43
VPS33A-205ENST00000541169 CLYBLQ8N0X4 340 aa17.73■□□□□ 0.43
VPS33A-205ENST00000541169 TMEM102Q8N9M5 508 aaPredicted RBP17.73■□□□□ 0.43
VPS33A-205ENST00000541169 FER1L6-AS2Q96M78 137 aa17.73■□□□□ 0.43
VPS33A-205ENST00000541169 AICDAQ9GZX7 198 aa17.73■□□□□ 0.43
VPS33A-205ENST00000541169 LYARQ9NX58 379 aaKnown RBP17.73■□□□□ 0.43
VPS33A-205ENST00000541169 HCN3Q9P1Z3 774 aa17.73■□□□□ 0.43
VPS33A-205ENST00000541169 C19orf25Q9UFG5 118 aaPredicted RBP17.73■□□□□ 0.43
VPS33A-205ENST00000541169 MKL2Q9ULH7 1088 aa17.73■□□□□ 0.43
VPS33A-205ENST00000541169 DAPP1Q9UN19 280 aa17.73■□□□□ 0.43
VPS33A-205ENST00000541169 SLC12A4Q9UP95 1085 aa17.73■□□□□ 0.43
VPS33A-205ENST00000541169 MMACHCQ9Y4U1 282 aa17.73■□□□□ 0.43
VPS33A-205ENST00000541169 MRPS18BQ9Y676 258 aaKnown RBP17.73■□□□□ 0.43
VPS33A-205ENST00000541169 ARHGAP10A1A4S6 786 aa17.72■□□□□ 0.43
VPS33A-205ENST00000541169 CDC14CA4D256 554 aa17.72■□□□□ 0.43
VPS33A-205ENST00000541169 PLPP1O14494 284 aa17.72■□□□□ 0.43
VPS33A-205ENST00000541169 AZIN1O14977 448 aa17.72■□□□□ 0.43
VPS33A-205ENST00000541169 NKX2-8O15522 239 aa17.72■□□□□ 0.43
VPS33A-205ENST00000541169 CNOT3O75175 753 aaKnown RBP17.72■□□□□ 0.43
VPS33A-205ENST00000541169 UMODP07911 640 aa17.72■□□□□ 0.43
VPS33A-205ENST00000541169 WT1P19544 449 aaPredicted RBP17.72■□□□□ 0.43
VPS33A-205ENST00000541169 GSTM5P46439 218 aa17.72■□□□□ 0.43
VPS33A-205ENST00000541169 HSD17B7P56937 341 aa17.72■□□□□ 0.43
VPS33A-205ENST00000541169 RAB38P57729 211 aa17.72■□□□□ 0.43
VPS33A-205ENST00000541169 RPS18P62269 152 aaKnown RBP17.72■□□□□ 0.43
VPS33A-205ENST00000541169 AP2B1P63010 937 aa17.72■□□□□ 0.43
VPS33A-205ENST00000541169 MAT1AQ00266 395 aaKnown RBP17.72■□□□□ 0.43
VPS33A-205ENST00000541169 SRSF6Q13247 344 aaKnown RBP17.72■□□□□ 0.43
VPS33A-205ENST00000541169 BIKQ13323 160 aa17.72■□□□□ 0.43
VPS33A-205ENST00000541169 MPP2Q14168 576 aa17.72■□□□□ 0.43
VPS33A-205ENST00000541169 CHI3L2Q15782 390 aa17.72■□□□□ 0.43
VPS33A-205ENST00000541169 SPIN4Q56A73 249 aa17.72■□□□□ 0.43
VPS33A-205ENST00000541169 SGO1Q5FBB7 561 aa17.72■□□□□ 0.43
VPS33A-205ENST00000541169 ATG16L1Q676U5 607 aa17.72■□□□□ 0.43
VPS33A-205ENST00000541169 UBE3DQ7Z6J8 389 aa17.72■□□□□ 0.43
VPS33A-205ENST00000541169 ZNF595Q8IYB9 648 aa17.72■□□□□ 0.43
VPS33A-205ENST00000541169 CA13Q8N1Q1 262 aa17.72■□□□□ 0.43
VPS33A-205ENST00000541169 DTWD1Q8N5C7 304 aa17.72■□□□□ 0.43
VPS33A-205ENST00000541169 PLPP5Q8NEB5 264 aa17.72■□□□□ 0.43
VPS33A-205ENST00000541169 APOBEC4Q8WW27 367 aaKnown RBP17.72■□□□□ 0.43
VPS33A-205ENST00000541169 MTFMTQ96DP5 389 aaKnown RBP17.72■□□□□ 0.43
VPS33A-205ENST00000541169 PAIP2Q9BPZ3 127 aaKnown RBP17.72■□□□□ 0.43
VPS33A-205ENST00000541169 SOX17Q9H6I2 414 aaPredicted RBP17.72■□□□□ 0.43
VPS33A-205ENST00000541169 PRDM9Q9NQV7 894 aa17.72■□□□□ 0.43
VPS33A-205ENST00000541169 SCN3AQ9NY46 2000 aa17.71■□□□□ 0.43
VPS33A-205ENST00000541169 A0A1W2PQ72 361 aa17.71■□□□□ 0.43
VPS33A-205ENST00000541169 ZNF860A6NHJ4 632 aa17.71■□□□□ 0.43
VPS33A-205ENST00000541169 SLC28A1O00337 649 aa17.71■□□□□ 0.43
VPS33A-205ENST00000541169 HSPA4LO95757 839 aa17.71■□□□□ 0.43
VPS33A-205ENST00000541169 PPP2R1BP30154 601 aa17.71■□□□□ 0.43
VPS33A-205ENST00000541169 LIM2P55344 173 aa17.71■□□□□ 0.43
VPS33A-205ENST00000541169 IL10RAQ13651 578 aa17.71■□□□□ 0.43
VPS33A-205ENST00000541169 MINDY4Q4G0A6 757 aa17.71■□□□□ 0.43
VPS33A-205ENST00000541169 HSP90B2PQ58FF3 399 aa17.71■□□□□ 0.43
VPS33A-205ENST00000541169 BORAQ6PGQ7 559 aa17.71■□□□□ 0.43
VPS33A-205ENST00000541169 CYP20A1Q6UW02 462 aa17.71■□□□□ 0.43
VPS33A-205ENST00000541169 QSOX2Q6ZRP7 698 aa17.71■□□□□ 0.43
VPS33A-205ENST00000541169 METTL4Q8N3J2 472 aa17.71■□□□□ 0.43
VPS33A-205ENST00000541169 ANKRD42Q8N9B4 389 aa17.71■□□□□ 0.43
VPS33A-205ENST00000541169 ARL8AQ96BM9 186 aa17.71■□□□□ 0.43
VPS33A-205ENST00000541169 PEX11GQ96HA9 241 aa17.71■□□□□ 0.43
VPS33A-205ENST00000541169 ILKAPQ9H0C8 392 aaPredicted RBP17.71■□□□□ 0.43
VPS33A-205ENST00000541169 ACSS2Q9NR19 701 aa17.71■□□□□ 0.43
VPS33A-205ENST00000541169 SIRT5Q9NXA8 310 aa17.71■□□□□ 0.43
VPS33A-205ENST00000541169 MAN2B2Q9Y2E5 1009 aa17.71■□□□□ 0.43
VPS33A-205ENST00000541169 TRAF6Q9Y4K3 522 aa17.71■□□□□ 0.43
VPS33A-205ENST00000541169 C4orf51C9J302 202 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 NPIPB8E9PQR5 432 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 PRMT3O60678 531 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 C8orf89P0DMQ9 161 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 PRKAR1AP10644 381 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 ACPPP15309 386 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 CERS1P27544 350 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 OTX2P32243 289 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 BSGP35613 385 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 BUD31P41223 144 aaPredicted RBP17.7■□□□□ 0.42
VPS33A-205ENST00000541169 CCR10P46092 362 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 ABCE1P61221 599 aaKnown RBP17.7■□□□□ 0.42
VPS33A-205ENST00000541169 TRA2BP62995 288 aaKnown RBP17.7■□□□□ 0.42
VPS33A-205ENST00000541169 STX3Q13277 289 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 SLAMF1Q13291 335 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 RUNX2Q13950 521 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 ABRAXAS2Q15018 415 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 IMPG1Q17R60 797 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 SYT16Q17RD7 645 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 COL28A1Q2UY09 1125 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 MFSD4BQ5TF39 518 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 KANK2Q63ZY3 851 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 MRGPREQ86SM8 312 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 GPR180Q86V85 440 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 APLFQ8IW19 511 aaPredicted RBP17.7■□□□□ 0.42
VPS33A-205ENST00000541169 OR5T3Q8NGG3 340 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 FAM76AQ8TAV0 307 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 WBP1Q96G27 269 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 VN1R1Q9GZP7 353 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 WDR41Q9HAD4 459 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 MED4Q9NPJ6 270 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 FARSBQ9NSD9 589 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms