RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, human

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-210	ENST00000540975	ANKRD46	Q86W74	232 aa		4.66	□□□□□ -1.66
YBX3-210	ENST00000540975	C4orf19	Q8IY42	314 aa		4.66	□□□□□ -1.66
YBX3-210	ENST00000540975	RTL3	Q8N8U3	475 aa	Known RBP	4.66	□□□□□ -1.66
YBX3-210	ENST00000540975	TYMSOS	Q8TAI1	123 aa		4.66	□□□□□ -1.66
YBX3-210	ENST00000540975	GBP5	Q96PP8	586 aa		4.66	□□□□□ -1.66
YBX3-210	ENST00000540975	GMEB2	Q9UKD1	530 aa		4.66	□□□□□ -1.66
YBX3-210	ENST00000540975	KIAA1217	Q5T5P2	1943 aa		4.66	□□□□□ -1.66
YBX3-210	ENST00000540975	TSPY3	P0CV98	308 aa		4.65	□□□□□ -1.67
YBX3-210	ENST00000540975	TSPY8	P0CW00	308 aa		4.65	□□□□□ -1.67
YBX3-210	ENST00000540975	IFNAR1	P17181	557 aa		4.65	□□□□□ -1.67
YBX3-210	ENST00000540975	SRD5A2	P31213	254 aa		4.65	□□□□□ -1.67
YBX3-210	ENST00000540975	GSK3B	P49841	420 aa		4.65	□□□□□ -1.67
YBX3-210	ENST00000540975	HSP90AB3P	Q58FF7	597 aa		4.65	□□□□□ -1.67
YBX3-210	ENST00000540975	ZRANB3	Q5FWF4	1079 aa		4.65	□□□□□ -1.67
YBX3-210	ENST00000540975	ARMCX4	Q5H9R4	360 aa		4.65	□□□□□ -1.67
YBX3-210	ENST00000540975	RFPL4B	Q6ZWI9	263 aa		4.65	□□□□□ -1.67
YBX3-210	ENST00000540975	MCM10	Q7L590	875 aa		4.65	□□□□□ -1.67
YBX3-210	ENST00000540975	METTL23	Q86XA0	190 aa		4.65	□□□□□ -1.67
YBX3-210	ENST00000540975	TDH	Q8IZJ6	230 aa		4.65	□□□□□ -1.67
YBX3-210	ENST00000540975	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	4.65	□□□□□ -1.67
YBX3-210	ENST00000540975	SMPDL3A	Q92484	453 aa		4.65	□□□□□ -1.67
YBX3-210	ENST00000540975	ZNF107	Q9UII5	783 aa	Predicted RBP	4.65	□□□□□ -1.67
YBX3-210	ENST00000540975	RPGRIP1L	Q68CZ1	1315 aa		4.65	□□□□□ -1.67
YBX3-210	ENST00000540975	SALL1	Q9NSC2	1324 aa		4.65	□□□□□ -1.67
YBX3-210	ENST00000540975	IGHV3-16	A0A0C4DH30	117 aa		4.64	□□□□□ -1.67
YBX3-210	ENST00000540975	TIMM44	O43615	452 aa		4.64	□□□□□ -1.67
YBX3-210	ENST00000540975	REN	P00797	406 aa		4.64	□□□□□ -1.67
YBX3-210	ENST00000540975	IGKV3-15	P01624	115 aa		4.64	□□□□□ -1.67
YBX3-210	ENST00000540975	RPL9	P32969	192 aa	Known RBP	4.64	□□□□□ -1.67
YBX3-210	ENST00000540975	COPB2	P35606	906 aa		4.64	□□□□□ -1.67
YBX3-210	ENST00000540975	SLC1A3	P43003	542 aa		4.64	□□□□□ -1.67
YBX3-210	ENST00000540975	BACE1	P56817	501 aa		4.64	□□□□□ -1.67
YBX3-210	ENST00000540975	RPP38	P78345	283 aa	Known RBP	4.64	□□□□□ -1.67
YBX3-210	ENST00000540975	PLPP4	Q5VZY2	271 aa		4.64	□□□□□ -1.67
YBX3-210	ENST00000540975	TMEM99	Q8N816	258 aa		4.64	□□□□□ -1.67
YBX3-210	ENST00000540975	ERO1A	Q96HE7	468 aa		4.64	□□□□□ -1.67
YBX3-210	ENST00000540975	PINK1	Q9BXM7	581 aa		4.64	□□□□□ -1.67
YBX3-210	ENST00000540975	ZNF581	Q9P0T4	197 aa		4.64	□□□□□ -1.67
YBX3-210	ENST00000540975	CENPJ	Q9HC77	1338 aa	Predicted RBP	4.64	□□□□□ -1.67
YBX3-210	ENST00000540975	ZNF646	O15015	1829 aa	Predicted RBP	4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	TRBV5-4	A0A0C4DH59	114 aa		4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	ILVBL	A1L0T0	632 aa		4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	ANHX	E9PGG2	379 aa		4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	SCO2	O43819	266 aa		4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	KRTAP1-4	P0C5Y4	121 aa		4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	FOLH1	Q04609	750 aa		4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	ITPK1	Q13572	414 aa		4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	CAVIN1	Q6NZI2	390 aa	Known RBP	4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	TMUB2	Q71RG4	321 aa		4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	ANKRD23	Q86SG2	305 aa		4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	NBPF5P	Q86XG9	351 aa	Predicted RBP	4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	ZNF584	Q8IVC4	421 aa		4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	C11orf53	Q8IXP5	236 aa		4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	THNSL1	Q8IYQ7	743 aa		4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	SLC43A2	Q8N370	569 aa		4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	SAP25	Q8TEE9	199 aa		4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	DNASE1L2	Q92874	299 aa		4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	SLC35C1	Q96A29	364 aa		4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	TNFRSF13C	Q96RJ3	184 aa		4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	RBM24	Q9BX46	236 aa	Known RBP	4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	PLEKHA3	Q9HB20	300 aa		4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	DEPP	Q9NTK1	212 aa		4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	THYN1	Q9P016	225 aa		4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	UBQLN2	Q9UHD9	624 aa		4.63	□□□□□ -1.67
YBX3-210	ENST00000540975	CROCC	Q5TZA2	2017 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	TRAV34	A0A0B4J273	112 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	ANKDD1B	A6NHY2	528 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975		A8MU10	97 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	P2RX6	O15547	441 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	SH3BGRL	O75368	114 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	OR6B1	O95007	311 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	FGF19	O95750	216 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	IGHG1	P01857	330 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	MT-ND1	P03886	318 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	RLN1	P04808	185 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	DNAH10OS	P0CZ25	163 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	SLC1A4	P43007	532 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	NPBWR1	P48145	328 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	C3AR1	Q16581	482 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	POM121L1P	Q3SYA9	428 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	TEX35	Q5T0J7	233 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	LEMD1	Q68G75	181 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	EMB	Q6PCB8	327 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	GLRX5	Q86SX6	157 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	OR1B1	Q8NGR6	318 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	BPIFA2	Q96DR5	249 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	EDEM3	Q9BZQ6	932 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	LSG1	Q9H089	658 aa	Known RBP	4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	NIP7	Q9Y221	180 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	HBS1L	Q9Y450	684 aa	Known RBP	4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	PFAS	O15067	1338 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	GON4L	Q3T8J9	2241 aa		4.62	□□□□□ -1.67
YBX3-210	ENST00000540975	ZNF318	Q5VUA4	2279 aa		4.61	□□□□□ -1.67
YBX3-210	ENST00000540975	C2orf92	A0A1B0GVN3	265 aa		4.61	□□□□□ -1.67
YBX3-210	ENST00000540975	IGLON5	A6NGN9	336 aa		4.61	□□□□□ -1.67
YBX3-210	ENST00000540975	WDR46	O15213	610 aa	Known RBP	4.61	□□□□□ -1.67
YBX3-210	ENST00000540975	ZNF354A	O60765	605 aa	Predicted RBP	4.61	□□□□□ -1.67
YBX3-210	ENST00000540975	SEMA4F	O95754	770 aa		4.61	□□□□□ -1.67
YBX3-210	ENST00000540975	AZU1	P20160	251 aa		4.61	□□□□□ -1.67
YBX3-210	ENST00000540975	RBBP4	Q09028	425 aa		4.61	□□□□□ -1.67

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