RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 FNTBP49356 437 aa11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 BLKP51451 505 aa11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 POLE2P56282 527 aa11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 DUSP2Q05923 314 aa11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 ABHD18Q0P651 414 aa11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 DEFB133Q30KQ1 61 aa11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 ANXA8L1Q5VT79 327 aa11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 SPESP1Q6UW49 350 aa11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 IKBIPQ70UQ0 350 aa11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 ERMP1Q7Z2K6 904 aa11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 PROSER1Q86XN7 944 aa11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 EPHX4Q8IUS5 362 aa11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 ARL14Q8N4G2 192 aa11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 TTLQ8NG68 377 aa11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 GOT1L1Q8NHS2 421 aaPredicted RBP11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 EXOSC8Q96B26 276 aaKnown RBP11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 NAF1Q96HR8 494 aaKnown RBP11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 NSMCE2Q96MF7 247 aa11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 PRPF18Q99633 342 aaKnown RBP11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 SLC29A1Q99808 456 aa11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 PCED1AQ9H1Q7 454 aa11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 CXorf36Q9H7Y0 433 aa11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 ANAPC2Q9UJX6 822 aa11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 ADAM29Q9UKF5 820 aa11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 DTNAQ9Y4J8 743 aa11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 ASB4Q9Y574 426 aa11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 TTC28Q96AY4 2481 aa11.66□□□□□ -0.54
AP003559.1-201ENST00000540906 A0A1W2PR48 441 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 A0A1W2PRB8 838 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 OR5K4A6NMS3 321 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 EIF4E1BA6NMX2 242 aaKnown RBP11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 PGRMC2O15173 223 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 CREG1O75629 220 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 STAMBPO95630 424 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 FAM58BPP0C7Q3 252 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 CKMT2P17540 419 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 HIST1H1TP22492 207 aaPredicted RBP11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 ZXDAP98168 799 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 ZNF750Q32MQ0 723 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 TMEM35AQ53FP2 167 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 C18orf63Q68DL7 685 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 MRM1Q6IN84 353 aaKnown RBP11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 ZCCHC8Q6NZY4 707 aaKnown RBP11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 PAGE2Q7Z2X7 111 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 R3HCC1LQ7Z5L2 792 aaKnown RBP11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 ASPGQ86U10 573 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 IQCHQ86VS3 1027 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 DCP2Q8IU60 420 aaKnown RBP11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 ACOT4Q8N9L9 421 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 PAPD5Q8NDF8 572 aaKnown RBP11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 TRPV3Q8NET8 790 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 OR2L5Q8NG80 312 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 FBXO30Q8TB52 745 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 ZFPM2Q8WW38 1151 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 MTERF3Q96E29 417 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 REXO5Q96IC2 774 aaKnown RBP11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 SH3GL1Q99961 368 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 GORASP2Q9H8Y8 452 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 MIEF1Q9NQG6 463 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 AGPAT4Q9NRZ5 378 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 FBXW2Q9UKT8 454 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 ATG4BQ9Y4P1 393 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 PCDH15Q96QU1 1955 aa11.65□□□□□ -0.54
AP003559.1-201ENST00000540906 OR5K3A6NET4 321 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 SAC3D1A6NKF1 404 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 GSTA4O15217 222 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 CASC3O15234 703 aaKnown RBP11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 GPIP06744 558 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 ZCCHC18P0CG32 403 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 ZNF888P0CJ79 500 aaPredicted RBP11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 TDGF1P13385 188 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 ST6GAL1P15907 406 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 ACADSP16219 412 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 PSMA4P25789 261 aaKnown RBP11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 CDK9P50750 372 aaKnown RBP11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 CRYBA2P53672 197 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 BNC1Q01954 994 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 SLAMF1Q13291 335 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 IRAK1BP1Q5VVH5 260 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 SERPINA11Q86U17 422 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 ZCCHC10Q8TBK6 192 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 FAM174AQ8TBP5 190 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 NT5CQ8TCD5 201 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 UTP15Q8TED0 518 aaKnown RBP11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 KLHL6Q8WZ60 621 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 DNASE2BQ8WZ79 361 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 MAL2Q969L2 176 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 TM4SF19Q96DZ7 209 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 SPACA7Q96KW9 195 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 QRFPRQ96P65 431 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 SLC35A5Q9BS91 424 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 EPS8L2Q9H6S3 715 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 COQ10BQ9H8M1 238 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 FAM60AQ9NP50 221 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 SIRT3Q9NTG7 399 aaPredicted RBP11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 VPS4AQ9UN37 437 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 MAPRE3Q9UPY8 281 aa11.65□□□□□ -0.55
AP003559.1-201ENST00000540906 A0A1B0GVT2 93 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms