RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 NTMT1Q9BV86 223 aa8.69□□□□□ -1.02
SNHG1-215ENST00000540904 NPLQ9BXD5 320 aaPredicted RBP8.69□□□□□ -1.02
SNHG1-215ENST00000540904 ZNF700Q9H0M5 742 aa8.69□□□□□ -1.02
SNHG1-215ENST00000540904 DMRT3Q9NQL9 472 aa8.69□□□□□ -1.02
SNHG1-215ENST00000540904 PRDM7Q9NQW5 492 aa8.69□□□□□ -1.02
SNHG1-215ENST00000540904 RIC8BQ9NVN3 520 aa8.69□□□□□ -1.02
SNHG1-215ENST00000540904 C19orf25Q9UFG5 118 aaPredicted RBP8.69□□□□□ -1.02
SNHG1-215ENST00000540904 ADGRE2Q9UHX3 823 aa8.69□□□□□ -1.02
SNHG1-215ENST00000540904 RAB21Q9UL25 225 aa8.69□□□□□ -1.02
SNHG1-215ENST00000540904 EMCNQ9ULC0 261 aa8.69□□□□□ -1.02
SNHG1-215ENST00000540904 GRID1Q9ULK0 1009 aa8.69□□□□□ -1.02
SNHG1-215ENST00000540904 PLAAQ9Y263 795 aa8.69□□□□□ -1.02
SNHG1-215ENST00000540904 ATRXP46100 2492 aa8.69□□□□□ -1.02
SNHG1-215ENST00000540904 A0A1W2PQ72 361 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 COPEO14579 308 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 SUV39H1O43463 412 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 SLC28A2O43868 658 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 KLHL41O60662 606 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 PROCP04070 461 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 TUBBP07437 444 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 UQCRHP07919 91 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 CELA2AP08217 269 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 PRR35P0CG20 571 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 MYL2P10916 166 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 IMPDH1P20839 514 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 HIST1H1TP22492 207 aaPredicted RBP8.68□□□□□ -1.02
SNHG1-215ENST00000540904 PTX3P26022 381 aaPredicted RBP8.68□□□□□ -1.02
SNHG1-215ENST00000540904 CRHR1P34998 444 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 SSR2P43308 183 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 LIM2P55344 173 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 SOX8P57073 446 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 OR4D2P58180 307 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 BTG2P78543 158 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 CLCQ05315 142 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 ACTN3Q08043 901 aaPredicted RBP8.68□□□□□ -1.02
SNHG1-215ENST00000540904 KLRB1Q12918 225 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 IFT88Q13099 833 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 TRAF3Q13114 568 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 AP5B1Q2VPB7 878 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 UNC50Q53HI1 259 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 SFT2D3Q587I9 215 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 SGO1Q5FBB7 561 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 ZNF678Q5SXM1 525 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 AGAP7PQ5VUJ5 663 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 FRG2Q64ET8 278 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 OR4C11Q6IEV9 310 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 LETMD1Q6P1Q0 360 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 ZYG11AQ6WRX3 759 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 ZNF793Q6ZN11 406 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 SRRM1Q8IYB3 904 aaKnown RBP8.68□□□□□ -1.02
SNHG1-215ENST00000540904 RIBC1Q8N443 379 aaPredicted RBP8.68□□□□□ -1.02
SNHG1-215ENST00000540904 MREGQ8N565 214 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 AMER2Q8N7J2 671 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 CCNYL1Q8N7R7 359 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 ACOT4Q8N9L9 421 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 PLPP5Q8NEB5 264 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 WDR20Q8TBZ3 569 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 RGMAQ96B86 450 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 PTCHD1Q96NR3 888 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 AGAP4Q96P64 663 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 FRG2BQ96QU4 278 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 TBCDQ9BTW9 1192 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 TUBB6Q9BUF5 446 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 SORBS1Q9BX66 1292 aaKnown RBP8.68□□□□□ -1.02
SNHG1-215ENST00000540904 C1QTNF3Q9BXJ4 246 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 MFRPQ9BY79 579 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 ROGDIQ9GZN7 287 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 LHPPQ9H008 270 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 C12orf65Q9H3J6 166 aaKnown RBP8.68□□□□□ -1.02
SNHG1-215ENST00000540904 ELOVL6Q9H5J4 265 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 ZNF552Q9H707 407 aaPredicted RBP8.68□□□□□ -1.02
SNHG1-215ENST00000540904 PRDM9Q9NQV7 894 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 TSC22D4Q9Y3Q8 395 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 PCDHGB7Q9Y5F8 929 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 PIEZO2Q9H5I5 2752 aa8.68□□□□□ -1.02
SNHG1-215ENST00000540904 G3V2L1 256 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 FOXE1O00358 373 aaPredicted RBP8.67□□□□□ -1.02
SNHG1-215ENST00000540904 CYR61O00622 381 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 CLDN4O14493 209 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 PLPP1O14494 284 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 PLIN3O60664 434 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 DPM1O60762 260 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 ETHE1O95571 254 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 MLYCDO95822 493 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 SERPINA7P05543 415 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 ICAM2P13598 275 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 ATP5A1P25705 553 aaKnown RBP8.67□□□□□ -1.02
SNHG1-215ENST00000540904 HNRNPFP52597 415 aaKnown RBP8.67□□□□□ -1.02
SNHG1-215ENST00000540904 RAB38P57729 211 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 SLC18A2Q05940 514 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 SLC13A2Q13183 592 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 SLAMF1Q13291 335 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 RCN2Q14257 317 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 BTBD16Q32M84 506 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 CCDC153Q494R4 210 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 GGTA1PQ4G0N0 100 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 NADK2Q4G0N4 442 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 FAM219BQ5XKK7 198 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 PAPD4Q6PIY7 484 aaKnown RBP8.67□□□□□ -1.02
SNHG1-215ENST00000540904 ATG14Q6ZNE5 492 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms