RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 C17orf107Q6ZR85 190 aa2.68□□□□□ -1.98
MDM2-227ENST00000540709 C15orf52Q6ZUT6 534 aaKnown RBP2.68□□□□□ -1.98
MDM2-227ENST00000540709 RFPL4BQ6ZWI9 263 aa2.68□□□□□ -1.98
MDM2-227ENST00000540709 IQUBQ8NA54 791 aa2.68□□□□□ -1.98
MDM2-227ENST00000540709 CCDC191Q8NCU4 936 aa2.68□□□□□ -1.98
MDM2-227ENST00000540709 OR6T1Q8NGN1 323 aa2.68□□□□□ -1.98
MDM2-227ENST00000540709 OR1B1Q8NGR6 318 aa2.68□□□□□ -1.98
MDM2-227ENST00000540709 BADQ92934 168 aa2.68□□□□□ -1.98
MDM2-227ENST00000540709 VPS33AQ96AX1 596 aa2.68□□□□□ -1.98
MDM2-227ENST00000540709 LURAP1Q96LR2 239 aa2.68□□□□□ -1.98
MDM2-227ENST00000540709 RAB3IPQ96QF0 476 aaPredicted RBP2.68□□□□□ -1.98
MDM2-227ENST00000540709 NAA11Q9BSU3 229 aaPredicted RBP2.68□□□□□ -1.98
MDM2-227ENST00000540709 TEX13BQ9BXU2 312 aa2.68□□□□□ -1.98
MDM2-227ENST00000540709 MTIF3Q9H2K0 278 aaKnown RBP2.68□□□□□ -1.98
MDM2-227ENST00000540709 MRGBPQ9NV56 204 aa2.68□□□□□ -1.98
MDM2-227ENST00000540709 THYN1Q9P016 225 aa2.68□□□□□ -1.98
MDM2-227ENST00000540709 DHRS4-AS1Q9P1J3 65 aa2.68□□□□□ -1.98
MDM2-227ENST00000540709 NYAP2Q9P242 653 aa2.68□□□□□ -1.98
MDM2-227ENST00000540709 ARMCX1Q9P291 453 aa2.68□□□□□ -1.98
MDM2-227ENST00000540709 CFDP1Q9UEE9 299 aaPredicted RBP2.68□□□□□ -1.98
MDM2-227ENST00000540709 NIP7Q9Y221 180 aaKnown RBP eCLIP2.68□□□□□ -1.98
MDM2-227ENST00000540709 TMCO5BA8MYB1 307 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 CCDC188H7C350 402 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 LRRTM2O43300 516 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 PLOD3O60568 738 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 SEMA4FO95754 770 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 CRKLP46109 303 aaKnown RBP2.67□□□□□ -1.98
MDM2-227ENST00000540709 RAD23AP54725 363 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 RPS27AP62979 156 aaKnown RBP2.67□□□□□ -1.98
MDM2-227ENST00000540709 CNTN1Q12860 1018 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 ABRQ12979 859 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 UGCGQ16739 394 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 HYAL4Q2M3T9 481 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 KRBOX4Q5JUW0 171 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 FAM46CQ5VWP2 391 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 SLC27A4Q6P1M0 643 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 C16orf54Q6UWD8 224 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 BTNL8Q6UX41 500 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 TMEM64Q6YI46 380 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 PRR22Q8IZ63 422 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 OR8H2Q8N162 312 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 SNRNP27Q8WVK2 155 aaKnown RBP2.67□□□□□ -1.98
MDM2-227ENST00000540709 PCNPQ8WW12 178 aaKnown RBP2.67□□□□□ -1.98
MDM2-227ENST00000540709 SMPDL3AQ92484 453 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 RCHY1Q96PM5 261 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 FERMT1Q9BQL6 677 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 PDRG1Q9NUG6 133 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 RSPH14Q9UHP6 348 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 IKZF3Q9UKT9 509 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 MRPL11Q9Y3B7 192 aaKnown RBP2.67□□□□□ -1.98
MDM2-227ENST00000540709 PCDHGA1Q9Y5H4 931 aa2.67□□□□□ -1.98
MDM2-227ENST00000540709 TRAV9-2A0A087WT02 112 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 ANXA2P2A6NMY6 339 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 ZNF732B4DXR9 585 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 NPIPA3F8WFD2 350 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 FBP2O00757 339 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 PPIP5K2O43314 1243 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 SRPX2O60687 465 aaPredicted RBP2.66□□□□□ -1.98
MDM2-227ENST00000540709 OR6B1O95007 311 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 PGLSO95336 258 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 DLATP10515 647 aaKnown RBP2.66□□□□□ -1.98
MDM2-227ENST00000540709 LBPP18428 481 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 IGLV3-21P80748 117 aaPredicted RBP2.66□□□□□ -1.98
MDM2-227ENST00000540709 TNK1Q13470 666 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 PPA1Q15181 289 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 ZNF79Q15937 498 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 POM121L1PQ3SYA9 428 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 C6orf136Q5SQH8 315 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 RPUSD3Q6P087 351 aaKnown RBP2.66□□□□□ -1.98
MDM2-227ENST00000540709 TBC1D10CQ8IV04 446 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 NAXDQ8IW45 347 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 C4orf19Q8IY42 314 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 CCAR2Q8N163 923 aaKnown RBP2.66□□□□□ -1.98
MDM2-227ENST00000540709 SLC43A2Q8N370 569 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 KIF18AQ8NI77 898 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 LIPHQ8WWY8 451 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 ZNF274Q96GC6 653 aaPredicted RBP2.66□□□□□ -1.98
MDM2-227ENST00000540709 OR10A4Q9H209 315 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 C5orf66Q9H5L9 145 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 PDFQ9HBH1 243 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 KLK4Q9Y5K2 254 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 LIPGQ9Y5X9 500 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 GON4LQ3T8J9 2241 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 FAM205AQ6ZU69 1335 aa2.66□□□□□ -1.98
MDM2-227ENST00000540709 TRBV5-4A0A0C4DH59 114 aa2.65□□□□□ -1.99
MDM2-227ENST00000540709 ANHXE9PGG2 379 aa2.65□□□□□ -1.99
MDM2-227ENST00000540709 FLRT2O43155 660 aa2.65□□□□□ -1.99
MDM2-227ENST00000540709 ZNF253O75346 499 aa2.65□□□□□ -1.99
MDM2-227ENST00000540709 ANGPTL1O95841 491 aa2.65□□□□□ -1.99
MDM2-227ENST00000540709 MOCS2O96007 188 aaPredicted RBP2.65□□□□□ -1.99
MDM2-227ENST00000540709 PIGRP01833 764 aa2.65□□□□□ -1.99
MDM2-227ENST00000540709 SUPT20HL2P0C7V6 817 aa2.65□□□□□ -1.99
MDM2-227ENST00000540709 ATP6V1B1P15313 513 aa2.65□□□□□ -1.99
MDM2-227ENST00000540709 PDGFRAP16234 1089 aa2.65□□□□□ -1.99
MDM2-227ENST00000540709 PSMB4P28070 264 aa2.65□□□□□ -1.99
MDM2-227ENST00000540709 BRCC3P46736 316 aa2.65□□□□□ -1.99
MDM2-227ENST00000540709 OR3A3P47888 321 aa2.65□□□□□ -1.99
MDM2-227ENST00000540709 CDX1P47902 265 aaPredicted RBP2.65□□□□□ -1.99
MDM2-227ENST00000540709 BACE1P56817 501 aa2.65□□□□□ -1.99
MDM2-227ENST00000540709 ZNF273Q14593 569 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms