RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 NLNQ9BYT8 704 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 GPR63Q9BZJ6 419 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 ZNF768Q9H5H4 540 aaKnown RBP5.84□□□□□ -1.47
PTPRD-214ENST00000540109 SEMA4BQ9NPR2 832 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-214ENST00000540109 TRIP12Q14669 1992 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-214ENST00000540109 NT5C1B-RDH14C9J2C7 533 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 EIF1AYO14602 144 aaKnown RBP5.84□□□□□ -1.47
PTPRD-214ENST00000540109 PRAMEF11O60813 436 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 CXCL10P02778 98 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 IL3P08700 152 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 LINC00032P0C843 101 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 SLC2A5P22732 501 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 S100GP29377 79 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 ATP5C1P36542 298 aaKnown RBP5.84□□□□□ -1.47
PTPRD-214ENST00000540109 EIF1AXP47813 144 aaKnown RBP5.84□□□□□ -1.47
PTPRD-214ENST00000540109 CSRP3P50461 194 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 RAPSNQ13702 412 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 SLC8B1Q6J4K2 584 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 PAPD4Q6PIY7 484 aaKnown RBP5.84□□□□□ -1.47
PTPRD-214ENST00000540109 KDELC1Q6UW63 502 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 MACC1Q6ZN28 852 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 LRRTM3Q86VH5 581 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 SLC41A1Q8IVJ1 513 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 SVBPQ8N300 66 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 CELF2-AS1Q8N7Q2 184 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 RHOXF1Q8NHV9 184 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 CD300LFQ8TDQ1 290 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 STYXQ8WUJ0 223 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 TMEM203Q969S6 136 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 LGALS12Q96DT0 336 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 SLC22A11Q9NSA0 550 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 SMOXQ9NWM0 555 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 C1orf109Q9NX04 203 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 NAALAD2Q9Y3Q0 740 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 CMAHPQ9Y471 501 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 MTMR11A4FU01 709 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 MEIS3P2A8K0S8 358 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 SOCS2O14508 198 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 IPO13O94829 963 aaKnown RBP5.84□□□□□ -1.47
PTPRD-214ENST00000540109 RB1P06400 928 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 CDK1P06493 297 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 GJA1P17302 382 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 ALDH3B2P48448 385 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 WNT3AP56704 352 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 ACVR1Q04771 509 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 FPGSQ05932 587 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 GPAT3Q53EU6 434 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 MS4A13Q5J8X5 152 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 SLC30A6Q6NXT4 461 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 KBTBD6Q86V97 674 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 INO80EQ8NBZ0 244 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-214ENST00000540109 NDRG1Q92597 394 aaKnown RBP5.84□□□□□ -1.47
PTPRD-214ENST00000540109 NELL1Q92832 810 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 CAPNS2Q96L46 248 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 TOX2Q96NM4 488 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 NECTIN4Q96NY8 510 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 RNF32Q9H0A6 362 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 REEP4Q9H6H4 257 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 CHRAC1Q9NRG0 131 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 ELOVL7A1L3X0 281 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 HMX2A2RU54 273 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 FAM234BA2RU67 622 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 MEIOCA2RUB1 952 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 ENPP3O14638 875 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 SUV39H1O43463 412 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 UGT2B17O75795 530 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 INHAP05111 366 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 C2P06681 752 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 HOXB1P14653 301 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-214ENST00000540109 CHI3L1P36222 383 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-214ENST00000540109 VEGFCP49767 419 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 LIMK1P53667 647 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 TSTQ16762 297 aaKnown RBP5.84□□□□□ -1.47
PTPRD-214ENST00000540109 CMTR2Q8IYT2 770 aaKnown RBP5.84□□□□□ -1.47
PTPRD-214ENST00000540109 PGBD3Q8N328 593 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 LIX1Q8N485 282 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 ESX1Q8N693 406 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 UFD1Q92890 307 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 PPM1MQ96MI6 270 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 TNKS2Q9H2K2 1166 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 CWH43Q9H720 699 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 ABCB8Q9NUT2 735 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 PCDHGB7Q9Y5F8 929 aa5.84□□□□□ -1.47
PTPRD-214ENST00000540109 EFCAB7A8K855 629 aa5.84□□□□□ -1.48
PTPRD-214ENST00000540109 SMLR1H3BR10 107 aa5.84□□□□□ -1.48
PTPRD-214ENST00000540109 FGF19O95750 216 aa5.84□□□□□ -1.48
PTPRD-214ENST00000540109 GLAP06280 429 aa5.84□□□□□ -1.48
PTPRD-214ENST00000540109 SYN1P17600 705 aa5.84□□□□□ -1.48
PTPRD-214ENST00000540109 TACR2P21452 398 aa5.84□□□□□ -1.48
PTPRD-214ENST00000540109 CHMP24386 653 aa5.84□□□□□ -1.48
PTPRD-214ENST00000540109 GRK4P32298 578 aa5.84□□□□□ -1.48
PTPRD-214ENST00000540109 PPM1AP35813 382 aa5.84□□□□□ -1.48
PTPRD-214ENST00000540109 NRLP54845 237 aa5.84□□□□□ -1.48
PTPRD-214ENST00000540109 BLOC1S1P78537 153 aa5.84□□□□□ -1.48
PTPRD-214ENST00000540109 CYCSP99999 105 aaKnown RBP5.84□□□□□ -1.48
PTPRD-214ENST00000540109 CHRNEQ04844 493 aa5.84□□□□□ -1.48
PTPRD-214ENST00000540109 LBHQ53QV2 105 aaPredicted RBP5.84□□□□□ -1.48
PTPRD-214ENST00000540109 OR4C6Q8NH72 309 aa5.84□□□□□ -1.48
PTPRD-214ENST00000540109 THAP6Q8TBB0 222 aa5.84□□□□□ -1.48
PTPRD-214ENST00000540109 SGK3Q96BR1 496 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms