RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 MAPK12P53778 367 aa16.08■□□□□ 0.17
COPS3-212ENST00000539941 STXBP1P61764 594 aaKnown RBP16.08■□□□□ 0.17
COPS3-212ENST00000539941 TGM3Q08188 693 aa16.08■□□□□ 0.17
COPS3-212ENST00000539941 CYP4F3Q08477 520 aa16.08■□□□□ 0.17
COPS3-212ENST00000539941 C2orf80Q0P641 193 aa16.08■□□□□ 0.17
COPS3-212ENST00000539941 OR4C11Q6IEV9 310 aa16.08■□□□□ 0.17
COPS3-212ENST00000539941 LCN8Q6JVE9 175 aa16.08■□□□□ 0.17
COPS3-212ENST00000539941 FIGLAQ6QHK4 219 aa16.08■□□□□ 0.17
COPS3-212ENST00000539941 C17orf82Q86X59 251 aaPredicted RBP16.08■□□□□ 0.17
COPS3-212ENST00000539941 HIPK4Q8NE63 616 aa16.08■□□□□ 0.17
COPS3-212ENST00000539941 TNIP2Q8NFZ5 429 aa16.08■□□□□ 0.17
COPS3-212ENST00000539941 PYDC1Q8WXC3 89 aa16.08■□□□□ 0.17
COPS3-212ENST00000539941 PPCDCQ96CD2 204 aa16.08■□□□□ 0.17
COPS3-212ENST00000539941 ZNF764Q96H86 408 aaPredicted RBP16.08■□□□□ 0.17
COPS3-212ENST00000539941 LRGUKQ96M69 825 aa16.08■□□□□ 0.17
COPS3-212ENST00000539941 MRPS26Q9BYN8 205 aaKnown RBP16.08■□□□□ 0.17
COPS3-212ENST00000539941 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.08■□□□□ 0.17
COPS3-212ENST00000539941 PCDHAC1Q9H158 963 aa16.08■□□□□ 0.17
COPS3-212ENST00000539941 FAIMQ9NVQ4 179 aa16.08■□□□□ 0.17
COPS3-212ENST00000539941 EXO1Q9UQ84 846 aaKnown RBP16.08■□□□□ 0.17
COPS3-212ENST00000539941 PCDHB14Q9Y5E9 798 aa16.08■□□□□ 0.17
COPS3-212ENST00000539941 SNX13Q9Y5W8 968 aa16.08■□□□□ 0.17
COPS3-212ENST00000539941 THADAQ6YHU6 1953 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 A0A0J9YY10 115 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 PIAS2O75928 621 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 GBAP04062 536 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 SERPIND1P05546 499 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 ANXA6P08133 673 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 PORP16435 677 aaPredicted RBP16.08■□□□□ 0.16
COPS3-212ENST00000539941 ZNF24P17028 368 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 MAGP20916 626 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 MTPNP58546 118 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 PLIN5Q00G26 463 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 HYAL2Q12891 473 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 AASDHQ4L235 1098 aaPredicted RBP16.08■□□□□ 0.16
COPS3-212ENST00000539941 LYSMD4Q5XG99 296 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 OGFOD3Q6PK18 319 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 TSSK4Q6SA08 328 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 UBE3DQ7Z6J8 389 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 ANKRD46Q86W74 232 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 SFTPA2Q8IWL1 248 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 ARL14Q8N4G2 192 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 OR2L5Q8NG80 312 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 NT5CQ8TCD5 201 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 MS4A6EQ96DS6 147 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 ITPKCQ96DU7 683 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 DUS3LQ96G46 650 aaKnown RBP16.08■□□□□ 0.16
COPS3-212ENST00000539941 KCNC2Q96PR1 638 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 PANX1Q96RD7 426 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 INPP5KQ9BT40 448 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 TBCDQ9BTW9 1192 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 KLHL4Q9C0H6 718 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 LHX9Q9NQ69 397 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 SH3BP4Q9P0V3 963 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 BTBD3Q9Y2F9 522 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 KLHL20Q9Y2M5 609 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 PCDHB3Q9Y5E6 796 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 USP34Q70CQ2 3546 aa16.08■□□□□ 0.16
COPS3-212ENST00000539941 CACNA1IQ9P0X4 2223 aa16.07■□□□□ 0.16
COPS3-212ENST00000539941 MYO15AQ9UKN7 3530 aa16.07■□□□□ 0.16
COPS3-212ENST00000539941 A0A1B0GTW7 788 aa16.07■□□□□ 0.16
COPS3-212ENST00000539941 AQP12BA6NM10 295 aa16.07■□□□□ 0.16
COPS3-212ENST00000539941 NOBOXO60393 691 aa16.07■□□□□ 0.16
COPS3-212ENST00000539941 IL3P08700 152 aa16.07■□□□□ 0.16
COPS3-212ENST00000539941 RHDQ02161 417 aa16.07■□□□□ 0.16
COPS3-212ENST00000539941 RGS1Q08116 209 aa16.07■□□□□ 0.16
COPS3-212ENST00000539941 HEPACAMQ14CZ8 416 aa16.07■□□□□ 0.16
COPS3-212ENST00000539941 IRAK1BP1Q5VVH5 260 aa16.07■□□□□ 0.16
COPS3-212ENST00000539941 PMS2CLQ68D20 193 aa16.07■□□□□ 0.16
COPS3-212ENST00000539941 ARMC6Q6NXE6 501 aa16.07■□□□□ 0.16
COPS3-212ENST00000539941 DNAJC14Q6Y2X3 702 aaPredicted RBP16.07■□□□□ 0.16
COPS3-212ENST00000539941 ASPGQ86U10 573 aa16.07■□□□□ 0.16
COPS3-212ENST00000539941 AQP12AQ8IXF9 295 aa16.07■□□□□ 0.16
COPS3-212ENST00000539941 FNDC8Q8TC99 324 aa16.07■□□□□ 0.16
COPS3-212ENST00000539941 GAB3Q8WWW8 586 aa16.07■□□□□ 0.16
COPS3-212ENST00000539941 PHF12Q96QT6 1004 aa16.07■□□□□ 0.16
COPS3-212ENST00000539941 CPPED1Q9BRF8 314 aaPredicted RBP16.07■□□□□ 0.16
COPS3-212ENST00000539941 THUMPD3Q9BV44 507 aaKnown RBP16.07■□□□□ 0.16
COPS3-212ENST00000539941 SORBS1Q9BX66 1292 aaKnown RBP16.07■□□□□ 0.16
COPS3-212ENST00000539941 SLC6A16Q9GZN6 736 aa16.07■□□□□ 0.16
COPS3-212ENST00000539941 MIEF1Q9NQG6 463 aa16.07■□□□□ 0.16
COPS3-212ENST00000539941 PADI4Q9UM07 663 aa16.07■□□□□ 0.16
COPS3-212ENST00000539941 CSNK1G3Q9Y6M4 447 aa16.07■□□□□ 0.16
COPS3-212ENST00000539941 MDC1Q14676 2089 aaKnown RBP16.07■□□□□ 0.16
COPS3-212ENST00000539941 TP53BP1Q12888 1972 aaPredicted RBP16.06■□□□□ 0.16
COPS3-212ENST00000539941 A0A0A6YYD5 115 aa16.06■□□□□ 0.16
COPS3-212ENST00000539941 TCRBV3S1A0A5B6 114 aa16.06■□□□□ 0.16
COPS3-212ENST00000539941 RTCAO00442 366 aaKnown RBP16.06■□□□□ 0.16
COPS3-212ENST00000539941 HOXB3P14651 431 aaPredicted RBP16.06■□□□□ 0.16
COPS3-212ENST00000539941 GNSP15586 552 aa16.06■□□□□ 0.16
COPS3-212ENST00000539941 DDCP20711 480 aa16.06■□□□□ 0.16
COPS3-212ENST00000539941 SSR2P43308 183 aa16.06■□□□□ 0.16
COPS3-212ENST00000539941 ERFP50548 548 aa16.06■□□□□ 0.16
COPS3-212ENST00000539941 MAZP56270 477 aaKnown RBP16.06■□□□□ 0.16
COPS3-212ENST00000539941 SELPLGQ14242 412 aa16.06■□□□□ 0.16
COPS3-212ENST00000539941 TOR1AIP1Q5JTV8 583 aa16.06■□□□□ 0.16
COPS3-212ENST00000539941 FCRL6Q6DN72 434 aa16.06■□□□□ 0.16
COPS3-212ENST00000539941 TRIM40Q6P9F5 258 aa16.06■□□□□ 0.16
COPS3-212ENST00000539941 ABHD17CQ6PCB6 329 aa16.06■□□□□ 0.16
COPS3-212ENST00000539941 VN1R4Q7Z5H5 301 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms