RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 BRD7Q9NPI1 651 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 H0YAE9 185 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 H3BSH0 61 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 TEX28O15482 410 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 C6orf141Q5SZD1 244 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 ZFAND4Q86XD8 727 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 OR8H3Q8N146 312 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 PROKR2Q8NFJ6 384 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 OR2L5Q8NG80 312 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 C1orf216Q8TAB5 229 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 OVCA2Q8WZ82 227 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 FAM129BQ96TA1 746 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 DPH2Q9BQC3 489 aaPredicted RBP14□□□□□ -0.17
CACNB1-206ENST00000539338 IFT46Q9NQC8 304 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 ERVK-18Q9QC07 812 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 ERVK-11Q9UQG0 969 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 IFI30P13284 250 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 CD72P21854 359 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 ADAM8P78325 824 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 ID2Q02363 134 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 RUNX3Q13761 415 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 ZNF789Q5FWF6 425 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 SLC22A15Q8IZD6 547 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 OR52E4Q8NGH9 312 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 ALKBH4Q9NXW9 302 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 YKT6O15498 198 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 T-ENOLP0DO92 83 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 S100GP29377 79 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 OR12D2P58182 307 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 ENPP2Q13822 863 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 SWI5Q1ZZU3 235 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 PIGGQ5H8A4 983 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 OGFRL1Q5TC84 451 aaPredicted RBP13.99□□□□□ -0.17
CACNB1-206ENST00000539338 FBXO42Q6P3S6 717 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 MINDY1Q8N5J2 469 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 CAMKVQ8NCB2 501 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 PPP1R14BQ96C90 147 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 FAM83CQ9BQN1 747 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 C2orf92A0A1B0GVN3 265 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 FAM221BA6H8Z2 402 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 GRID2O43424 1007 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 TRIM3O75382 744 aaPredicted RBP13.99□□□□□ -0.17
CACNB1-206ENST00000539338 AGR2O95994 175 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 EDN1P05305 212 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 PHC1P78364 1004 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 VMACQ2NL98 169 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 ANKDD1AQ495B1 522 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 B3GNT9Q6UX72 402 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 ZNF517Q6ZMY9 492 aaPredicted RBP13.99□□□□□ -0.17
CACNB1-206ENST00000539338 ADGRD2Q7Z7M1 963 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.99□□□□□ -0.17
CACNB1-206ENST00000539338 SMOXQ9NWM0 555 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 CLCA3PQ9Y6N3 262 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 PCDHGA12O60330 932 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 ST3GAL4Q11206 333 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 SLC35F1Q5T1Q4 408 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 ZNF627Q7L945 461 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 HMGN2P46Q86SG4 172 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 ISCA2Q86U28 154 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 CCDC36Q8IYA8 594 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 ZNF420Q8TAQ5 688 aaPredicted RBP13.99□□□□□ -0.17
CACNB1-206ENST00000539338 SMPDL3BQ92485 455 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 XKR8Q9H6D3 395 aa13.99□□□□□ -0.17
CACNB1-206ENST00000539338 A0A0X1KG70 313 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 MYADML2A6NDP7 307 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 KMOO15229 486 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 STC2O76061 302 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 CSN2P05814 226 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 ETV4P43268 484 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 RBPJQ06330 500 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 KCNC3Q14003 757 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 OR56A1Q8NGH5 318 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 ZFAND2BQ8WV99 257 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 SLC30A2Q9BRI3 323 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 SCML1Q9UN30 329 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 PKD1L3Q7Z443 1732 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 RCBTB2O95199 551 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 GSTT2BP0CG30 244 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 LIPJQ5W064 366 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 TUBA3EQ6PEY2 450 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 SLC9B2Q86UD5 537 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 SLITRK4Q8IW52 837 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 TOMM5Q8N4H5 51 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 DGAT2Q96PD7 388 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 TTTY10Q9BZA0 68 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 TBL1XR1Q9BZK7 514 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 C19orf25Q9UFG5 118 aaPredicted RBP13.98□□□□□ -0.17
CACNB1-206ENST00000539338 ACTL7AQ9Y615 435 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 ZNF840PA6NDX5 716 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 LILRB3O75022 631 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 ZNF432O94892 652 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 APOL3O95236 402 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 HLA-DPB1P04440 258 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 PFKLP17858 780 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 AP2S1P53680 142 aaPredicted RBP13.98□□□□□ -0.17
CACNB1-206ENST00000539338 CGB2Q6NT52 195 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 SYCE2Q6PIF2 218 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 ENPP6Q6UWR7 440 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 LINC00471Q8N535 108 aa13.98□□□□□ -0.17
CACNB1-206ENST00000539338 GRPEL2Q8TAA5 225 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms