RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 POLR1CO15160 346 aaPredicted RBP5.15□□□□□ -1.58
LRP6-203ENST00000538239 PGRP06401 933 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 PCSK2P16519 638 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 PIK3CBP42338 1070 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 NR0B1P51843 470 aaKnown RBP5.15□□□□□ -1.58
LRP6-203ENST00000538239 PMS2P3Q13401 168 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 OLFML2AQ68BL7 652 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 LGI4Q8N135 537 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 LRRC25Q8N386 305 aaPredicted RBP5.15□□□□□ -1.58
LRP6-203ENST00000538239 OR9I1Q8NGQ6 314 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 DIO2Q92813 273 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 TRIM43Q96BQ3 446 aaPredicted RBP5.15□□□□□ -1.58
LRP6-203ENST00000538239 MOCOSQ96EN8 888 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 TRMT2BQ96GJ1 504 aaKnown RBP5.15□□□□□ -1.58
LRP6-203ENST00000538239 COX4I2Q96KJ9 171 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 TTTY10Q9BZA0 68 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 TPT1P8Q9HAU6 139 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 ACTR10Q9NZ32 417 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 PISDQ9UG56 409 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 STRCQ7RTU9 1775 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 SLC30A4O14863 429 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 HAT1O14929 419 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 TXNL4AP83876 142 aaKnown RBP5.15□□□□□ -1.58
LRP6-203ENST00000538239 CDK3Q00526 305 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 ZNF846Q147U1 533 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 PPP1R3AQ16821 1122 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 BTBD16Q32M84 506 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 AKIRIN2Q53H80 203 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 RBM44Q6ZP01 1051 aaKnown RBP5.15□□□□□ -1.58
LRP6-203ENST00000538239 FRMD7Q6ZUT3 714 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 ZNF100Q8IYN0 542 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 SCRN2Q96FV2 425 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 DUSP23Q9BVJ7 150 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 OR51I1Q9H343 314 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 FAM120CQ9NX05 1096 aaKnown RBP5.15□□□□□ -1.58
LRP6-203ENST00000538239 SLC39A1Q9NY26 324 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 PCDHGB7Q9Y5F8 929 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 SPO11Q9Y5K1 396 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 PTGDR2Q9Y5Y4 395 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 SCN7AQ01118 1682 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 SRRM3A6NNA2 597 aaPredicted RBP5.15□□□□□ -1.58
LRP6-203ENST00000538239 A8MVJ9 347 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 M0QX08 132 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 ACOT7O00154 380 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 ZNF888P0CJ79 500 aaPredicted RBP5.15□□□□□ -1.58
LRP6-203ENST00000538239 TIMP2P16035 220 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 CSNK1EP49674 416 aaKnown RBP5.15□□□□□ -1.58
LRP6-203ENST00000538239 SIM1P81133 766 aaPredicted RBP5.15□□□□□ -1.58
LRP6-203ENST00000538239 DSC3Q14574 896 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 FAM180BQ6P0A1 224 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 PNCKQ6P2M8 343 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 CPXM2Q8N436 756 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 CCDC54Q8NEL0 328 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 MAFAQ8NHW3 353 aaPredicted RBP5.15□□□□□ -1.58
LRP6-203ENST00000538239 ADAMTS19Q8TE59 1207 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 ANKRD27Q96NW4 1050 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 MGME1Q9BQP7 344 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 B3GNT4Q9C0J1 378 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 CXCL16Q9H2A7 254 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 HPF1Q9NWY4 346 aa5.15□□□□□ -1.58
LRP6-203ENST00000538239 MYH9P35579 1960 aaKnown RBP5.15□□□□□ -1.58
LRP6-203ENST00000538239 CSTAP01040 98 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 FECHP22830 423 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 MRPS21P82921 87 aaKnown RBP5.15□□□□□ -1.59
LRP6-203ENST00000538239 ACY1Q03154 408 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 ST3GAL3Q11203 375 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 OR4D1Q15615 310 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 PERM1Q5SV97 790 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 FIGNL1Q6PIW4 674 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 RTL10Q7L3V2 364 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 ADGRD2Q7Z7M1 963 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 ZZZ3Q8IYH5 903 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 ZNF676Q8N7Q3 588 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.15□□□□□ -1.59
LRP6-203ENST00000538239 CXorf56Q9H5V9 222 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 LRIT1Q9P2V4 623 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 DNAJB9Q9UBS3 223 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 SGK494L7N484 410 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 MATN2O00339 956 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 ARPC2O15144 300 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 PRKAR1AP10644 381 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 NR4A1P22736 598 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 IL12RB1P42701 662 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 OR1E2P47887 323 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 GBX2P52951 348 aaPredicted RBP5.15□□□□□ -1.59
LRP6-203ENST00000538239 MGAT3Q09327 533 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 DOC2AQ14183 400 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 LRIT3Q3SXY7 679 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 PDCD4Q53EL6 469 aaKnown RBP5.15□□□□□ -1.59
LRP6-203ENST00000538239 ABHD17BQ5VST6 288 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 PARM1Q6UWI2 310 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 UNC5DQ6UXZ4 953 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 DPPA4Q7L190 304 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 ZNF627Q7L945 461 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 AQP11Q8NBQ7 271 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 OR14L1PQ8NHC6 308 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 UFD1Q92890 307 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 RMI1Q9H9A7 625 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 MEAF6Q9HAF1 191 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 TIAM2Q8IVF5 1701 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms