RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 BTG2P78543 158 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 RCN2Q14257 317 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 HERC3Q15034 1050 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 CHI3L2Q15782 390 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 KANK2Q63ZY3 851 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 FAAH2Q6GMR7 532 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 MRM1Q6IN84 353 aaKnown RBP12.34□□□□□ -0.43
CHFR-216ENST00000538235 ABHD13Q7L211 337 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 TBC1D19Q8N5T2 526 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 ACOT4Q8N9L9 421 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 FAM47BQ8NA70 645 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 AGR3Q8TD06 166 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 C11orf24Q96F05 449 aaPredicted RBP12.34□□□□□ -0.43
CHFR-216ENST00000538235 SEC16BQ96JE7 1060 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 BBC3Q96PG8 261 aaPredicted RBP12.34□□□□□ -0.43
CHFR-216ENST00000538235 WDR77Q9BQA1 342 aaPredicted RBP12.34□□□□□ -0.43
CHFR-216ENST00000538235 GPR87Q9BY21 358 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 SLC29A3Q9BZD2 475 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 TGIF2Q9GZN2 237 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 KCNK9Q9NPC2 374 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 ARGLU1Q9NWB6 273 aaPredicted RBP12.34□□□□□ -0.43
CHFR-216ENST00000538235 TEX10Q9NXF1 929 aaPredicted RBP12.34□□□□□ -0.43
CHFR-216ENST00000538235 ZNF282Q9UDV7 671 aaPredicted RBP12.34□□□□□ -0.43
CHFR-216ENST00000538235 ZDHHC2Q9UIJ5 367 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 MID2Q9UJV3 735 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 PPT2Q9UMR5 302 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 PIEZO2Q9H5I5 2752 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 IGKV3D-11A0A0A0MRZ8 115 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 IGHV3-20A0A0C4DH32 117 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 MYOCOSA0A1B0GUC4 107 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 IDSB3KWA1 339 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 H3BQF6 201 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 FOXE1O00358 373 aaPredicted RBP12.33□□□□□ -0.44
CHFR-216ENST00000538235 CYR61O00622 381 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 NPHS1O60500 1241 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 ZWINTO95229 277 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 MLYCDO95822 493 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 HIST1H1TP22492 207 aaPredicted RBP12.33□□□□□ -0.44
CHFR-216ENST00000538235 PPP2R1BP30154 601 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 FOLR3P41439 243 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 LIM2P55344 173 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 STXBP1P61764 594 aaKnown RBP12.33□□□□□ -0.44
CHFR-216ENST00000538235 RPS15P62841 145 aaKnown RBP12.33□□□□□ -0.44
CHFR-216ENST00000538235 Q0VFX4 171 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 HIST2H2ACQ16777 129 aaPredicted RBP12.33□□□□□ -0.44
CHFR-216ENST00000538235 HIST2H2AA3Q6FI13 130 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 KIRREL2Q6UWL6 708 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 CROCCP2Q86T23 111 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 METTL6Q8TCB7 284 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 SELENOMQ8WWX9 145 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 EXTL1Q92935 676 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 UBE2E3Q969T4 207 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 MIEF2Q96C03 454 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 CMTM7Q96FZ5 175 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 APIPQ96GX9 242 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 CRB3Q9BUF7 120 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 MKKSQ9NPJ1 570 aaPredicted RBP12.33□□□□□ -0.44
CHFR-216ENST00000538235 NECTIN3Q9NQS3 549 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 KCND3Q9UK17 655 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 DAPP1Q9UN19 280 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 FIS1Q9Y3D6 152 aa12.33□□□□□ -0.44
CHFR-216ENST00000538235 SMG1Q96Q15 3661 aaKnown RBP12.32□□□□□ -0.44
CHFR-216ENST00000538235 K7EM74 188 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 ENO1P06733 434 aaKnown RBP12.32□□□□□ -0.44
CHFR-216ENST00000538235 COX6A1P12074 109 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 MAOAP21397 527 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 HMOX2P30519 316 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 SERPINB1P30740 379 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 HPDP32754 393 aaPredicted RBP12.32□□□□□ -0.44
CHFR-216ENST00000538235 MTTPP55157 894 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 RAB38P57729 211 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 EEF1A2Q05639 463 aaKnown RBP12.32□□□□□ -0.44
CHFR-216ENST00000538235 BST1Q10588 318 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 CUL3Q13618 768 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 PCOLCEQ15113 449 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 TBR1Q16650 682 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 PRSS53Q2L4Q9 553 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 DEFB109BQ30KR1 87 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 CRTC2Q53ET0 693 aaPredicted RBP12.32□□□□□ -0.44
CHFR-216ENST00000538235 BROXQ5VW32 411 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 C18orf63Q68DL7 685 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 TRIM40Q6P9F5 258 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 TMEM205Q6UW68 189 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 COMMD6Q7Z4G1 85 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 NUDCD3Q8IVD9 361 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 SCUBE1Q8IWY4 988 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 METTL4Q8N3J2 472 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 ZNF781Q8N8C0 355 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 C3orf30Q96M34 536 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 SERINC2Q96SA4 455 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 YIPF2Q9BWQ6 316 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 ELOVL6Q9H5J4 265 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 GPN3Q9UHW5 284 aaPredicted RBP12.32□□□□□ -0.44
CHFR-216ENST00000538235 C3orf18Q9UK00 162 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 CDC14AQ9UNH5 594 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 SLC12A4Q9UP95 1085 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 ATG4BQ9Y4P1 393 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 ASB4Q9Y574 426 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 DNAJC15Q9Y5T4 150 aa12.32□□□□□ -0.44
CHFR-216ENST00000538235 EXPH5Q8NEV8 1989 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms