RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 CRATP43155 626 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 RORCP51449 518 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 CRISP3P54108 245 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 EPHB3P54753 998 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 SNRPGP62308 76 aaKnown RBP11.64□□□□□ -0.55
CPSF7-218ENST00000537641 SMAD3P84022 425 aaKnown RBP11.64□□□□□ -0.55
CPSF7-218ENST00000537641 ZXDBP98169 803 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 DOC2AQ14183 400 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 PTGES3Q15185 160 aaKnown RBP11.64□□□□□ -0.55
CPSF7-218ENST00000537641 ZNF630Q2M218 657 aaPredicted RBP11.64□□□□□ -0.55
CPSF7-218ENST00000537641 SPOUT1Q5T280 376 aaKnown RBP11.64□□□□□ -0.55
CPSF7-218ENST00000537641 PTCHD4Q6ZW05 846 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 USP45Q70EL2 814 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 VASH1Q7L8A9 365 aaPredicted RBP11.64□□□□□ -0.55
CPSF7-218ENST00000537641 DNAJB7Q7Z6W7 309 aaPredicted RBP11.64□□□□□ -0.55
CPSF7-218ENST00000537641 TMEM150AQ86TG1 271 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 THOC6Q86W42 341 aaKnown RBP11.64□□□□□ -0.55
CPSF7-218ENST00000537641 GALNT12Q8IXK2 581 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 TCEAL8Q8IYN2 117 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 TRIM63Q969Q1 353 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 ASIC4Q96FT7 647 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 SCRN2Q96FV2 425 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 DEFB118Q96PH6 123 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 MCCC1Q96RQ3 725 aaPredicted RBP11.64□□□□□ -0.55
CPSF7-218ENST00000537641 ROGDIQ9GZN7 287 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 SRRQ9GZT4 340 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 HHATLQ9HCP6 504 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 TAS2R16Q9NYV7 291 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 OGDHLQ9ULD0 1010 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 STUB1Q9UNE7 303 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 ANGPT4Q9Y264 503 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 SNX8Q9Y5X2 465 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 ENPP4Q9Y6X5 453 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 DSPPQ9NZW4 1301 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 CXorf51AA0A1B0GTR3 108 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 PRAMEF25A6NGN4 478 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 SMAD6O43541 496 aaKnown RBP11.63□□□□□ -0.55
CPSF7-218ENST00000537641 YES1P07947 543 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 ETFAP13804 333 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 ATP1B2P14415 290 aaPredicted RBP11.63□□□□□ -0.55
CPSF7-218ENST00000537641 RHCEP18577 417 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 TNFRSF1BP20333 461 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 RFX2P48378 723 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 ATN1P54259 1190 aaPredicted RBP11.63□□□□□ -0.55
CPSF7-218ENST00000537641 EEF1A2Q05639 463 aaKnown RBP11.63□□□□□ -0.55
CPSF7-218ENST00000537641 ASAH1Q13510 395 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 DDX39BQ13838 428 aaKnown RBP11.63□□□□□ -0.55
CPSF7-218ENST00000537641 FRMPD2BQ6IN97 320 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 TRIM40Q6P9F5 258 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 KLHL17Q6TDP4 642 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 VRK3Q8IV63 474 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 FAM217AQ8IXS0 508 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 OR52J3Q8NH60 311 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 NFKBIDQ8NI38 313 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 WFDC5Q8TCV5 224 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 VPS35Q96QK1 796 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 GDF15Q99988 308 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 TCF25Q9BQ70 676 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 BBS2Q9BXC9 721 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 SLC22A4Q9H015 551 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 ATG10Q9H0Y0 220 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 REEP4Q9H6H4 257 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 SGK2Q9HBY8 427 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 ACER3Q9NUN7 267 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 NDOR1Q9UHB4 597 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 MAFFQ9ULX9 164 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 SNX7Q9UNH6 387 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 CMAHPQ9Y471 501 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 MEIOCA2RUB1 952 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 FADS2P1A8MWK0 482 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 FAM25AB3EWG3 89 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 FAM25CB3EWG5 89 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 FAM25GB3EWG6 89 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 E7EQ34 232 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 GREM1O60565 184 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 GUCY1B2O75343 617 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 AP2A2O94973 939 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 OLFM2O95897 454 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 ADAP00813 363 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 URODP06132 367 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 ADRA2AP08913 450 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 ARAFP10398 606 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 IL7P13232 177 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 PSMA1P25786 263 aaKnown RBP11.63□□□□□ -0.55
CPSF7-218ENST00000537641 ITGB7P26010 798 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 GKP32189 559 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 PCBP3P57721 371 aaKnown RBP11.63□□□□□ -0.55
CPSF7-218ENST00000537641 CDK6Q00534 326 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 CHRNEQ04844 493 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 RUNX1T1Q06455 604 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 SCN1BQ07699 218 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 E2F2Q14209 437 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 NCF4Q15080 339 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 ZNF79Q15937 498 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 TBRG1Q3YBR2 411 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 COX20Q5RI15 118 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 NXNL2Q5VZ03 156 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 SLC39A5Q6ZMH5 540 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 Q6ZNB5 142 aa11.63□□□□□ -0.55
CPSF7-218ENST00000537641 LAS2Q8IYD9 372 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms