RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 FAR2Q96K12 515 aa19.21■□□□□ 0.67
LTBR-205ENST00000535739 DMRTA2Q96SC8 542 aa19.21■□□□□ 0.67
LTBR-205ENST00000535739 VKORC1Q9BQB6 163 aa19.21■□□□□ 0.67
LTBR-205ENST00000535739 CTNNAL1Q9UBT7 734 aa19.21■□□□□ 0.67
LTBR-205ENST00000535739 ZNF223Q9UK11 482 aaPredicted RBP19.21■□□□□ 0.67
LTBR-205ENST00000535739 ANKRD17O75179 2603 aaKnown RBP19.21■□□□□ 0.66
LTBR-205ENST00000535739 TGFBR3LH3BV60 316 aa19.2■□□□□ 0.66
LTBR-205ENST00000535739 ERI3O43414 337 aaKnown RBP19.2■□□□□ 0.66
LTBR-205ENST00000535739 PEX1O43933 1283 aa19.2■□□□□ 0.66
LTBR-205ENST00000535739 H2AFYO75367 372 aaKnown RBP19.2■□□□□ 0.66
LTBR-205ENST00000535739 ITGA10O75578 1167 aa19.2■□□□□ 0.66
LTBR-205ENST00000535739 GNAZP19086 355 aa19.2■□□□□ 0.66
LTBR-205ENST00000535739 SLC6A12P48065 614 aa19.2■□□□□ 0.66
LTBR-205ENST00000535739 HNRNPFP52597 415 aaKnown RBP19.2■□□□□ 0.66
LTBR-205ENST00000535739 DR1Q01658 176 aa19.2■□□□□ 0.66
LTBR-205ENST00000535739 TMIGD1Q6UXZ0 262 aa19.2■□□□□ 0.66
LTBR-205ENST00000535739 MDGA2Q7Z553 956 aa19.2■□□□□ 0.66
LTBR-205ENST00000535739 CYP4Z2PQ8N1L4 340 aa19.2■□□□□ 0.66
LTBR-205ENST00000535739 TMEM156Q8N614 296 aa19.2■□□□□ 0.66
LTBR-205ENST00000535739 FBXO36Q8NEA4 188 aa19.2■□□□□ 0.66
LTBR-205ENST00000535739 NCLNQ969V3 563 aa19.2■□□□□ 0.66
LTBR-205ENST00000535739 RHBDF1Q96CC6 855 aa19.2■□□□□ 0.66
LTBR-205ENST00000535739 MS4A6EQ96DS6 147 aa19.2■□□□□ 0.66
LTBR-205ENST00000535739 PRTFDC1Q9NRG1 225 aa19.2■□□□□ 0.66
LTBR-205ENST00000535739 MOCS1Q9NZB8 636 aa19.2■□□□□ 0.66
LTBR-205ENST00000535739 PPT2Q9UMR5 302 aa19.2■□□□□ 0.66
LTBR-205ENST00000535739 CLDN16Q9Y5I7 305 aa19.2■□□□□ 0.66
LTBR-205ENST00000535739 HIVEP1P15822 2718 aa19.19■□□□□ 0.66
LTBR-205ENST00000535739 A0A1B0GTH9 108 aa19.19■□□□□ 0.66
LTBR-205ENST00000535739 LRIT2A6NDA9 550 aa19.19■□□□□ 0.66
LTBR-205ENST00000535739 NCF1BA6NI72 391 aaPredicted RBP19.19■□□□□ 0.66
LTBR-205ENST00000535739 NCF1CA8MVU1 366 aaPredicted RBP19.19■□□□□ 0.66
LTBR-205ENST00000535739 KLRC4-KLRK1H3BQV0 150 aa19.19■□□□□ 0.66
LTBR-205ENST00000535739 TP73O15350 636 aa19.19■□□□□ 0.66
LTBR-205ENST00000535739 HS6ST1O60243 411 aa19.19■□□□□ 0.66
LTBR-205ENST00000535739 PRKNO60260 465 aaPredicted RBP19.19■□□□□ 0.66
LTBR-205ENST00000535739 CDC40O60508 579 aaKnown RBP eCLIP19.19■□□□□ 0.66
LTBR-205ENST00000535739 NCF1P14598 390 aaPredicted RBP19.19■□□□□ 0.66
LTBR-205ENST00000535739 GPR85P60893 370 aa19.19■□□□□ 0.66
LTBR-205ENST00000535739 CKAP4Q07065 602 aaKnown RBP19.19■□□□□ 0.66
LTBR-205ENST00000535739 PDIA2Q13087 525 aaKnown RBP19.19■□□□□ 0.66
LTBR-205ENST00000535739 TERF2Q15554 542 aa19.19■□□□□ 0.66
LTBR-205ENST00000535739 ADAMTSL2Q86TH1 951 aa19.19■□□□□ 0.66
LTBR-205ENST00000535739 KLHDC8AQ8IYD2 350 aa19.19■□□□□ 0.66
LTBR-205ENST00000535739 FAM47BQ8NA70 645 aa19.19■□□□□ 0.66
LTBR-205ENST00000535739 TTLQ8NG68 377 aa19.19■□□□□ 0.66
LTBR-205ENST00000535739 SDCCAG3Q96C92 435 aa19.19■□□□□ 0.66
LTBR-205ENST00000535739 VMP1Q96GC9 406 aa19.19■□□□□ 0.66
LTBR-205ENST00000535739 NPLQ9BXD5 320 aaPredicted RBP19.19■□□□□ 0.66
LTBR-205ENST00000535739 TRIM31Q9BZY9 425 aa19.19■□□□□ 0.66
LTBR-205ENST00000535739 RRAGDQ9NQL2 400 aaPredicted RBP19.19■□□□□ 0.66
LTBR-205ENST00000535739 PPIEQ9UNP9 301 aaKnown RBP19.19■□□□□ 0.66
LTBR-205ENST00000535739 HCFC1P51610 2035 aa19.18■□□□□ 0.66
LTBR-205ENST00000535739 PIAS1O75925 651 aa19.18■□□□□ 0.66
LTBR-205ENST00000535739 SEC31AO94979 1220 aaKnown RBP19.18■□□□□ 0.66
LTBR-205ENST00000535739 TPOP07202 933 aa19.18■□□□□ 0.66
LTBR-205ENST00000535739 SSTR2P30874 369 aa19.18■□□□□ 0.66
LTBR-205ENST00000535739 PTGS2P35354 604 aa19.18■□□□□ 0.66
LTBR-205ENST00000535739 GPR143P51810 404 aa19.18■□□□□ 0.66
LTBR-205ENST00000535739 PLA2G16P53816 162 aa19.18■□□□□ 0.66
LTBR-205ENST00000535739 HSD17B7P56937 341 aa19.18■□□□□ 0.66
LTBR-205ENST00000535739 RAB38P57729 211 aa19.18■□□□□ 0.66
LTBR-205ENST00000535739 SLC13A2Q13183 592 aa19.18■□□□□ 0.66
LTBR-205ENST00000535739 CMPK2Q5EBM0 449 aa19.18■□□□□ 0.66
LTBR-205ENST00000535739 C16orf47Q6ZP98 133 aaPredicted RBP19.18■□□□□ 0.66
LTBR-205ENST00000535739 CD163Q86VB7 1156 aa19.18■□□□□ 0.66
LTBR-205ENST00000535739 C16orf52Q8NHV5 167 aa19.18■□□□□ 0.66
LTBR-205ENST00000535739 FAM57AQ8TBR7 257 aa19.18■□□□□ 0.66
LTBR-205ENST00000535739 CA5BP1Q8WTZ4 195 aa19.18■□□□□ 0.66
LTBR-205ENST00000535739 VPS39Q96JC1 886 aa19.18■□□□□ 0.66
LTBR-205ENST00000535739 QRFPRQ96P65 431 aa19.18■□□□□ 0.66
LTBR-205ENST00000535739 LIN28AQ9H9Z2 209 aaKnown RBP19.18■□□□□ 0.66
LTBR-205ENST00000535739 HRH3Q9Y5N1 445 aa19.18■□□□□ 0.66
LTBR-205ENST00000535739 PHF3Q92576 2039 aaKnown RBP19.18■□□□□ 0.66
LTBR-205ENST00000535739 CLDN4O14493 209 aa19.17■□□□□ 0.66
LTBR-205ENST00000535739 TAPBPO15533 448 aa19.17■□□□□ 0.66
LTBR-205ENST00000535739 B3GALT2O43825 422 aa19.17■□□□□ 0.66
LTBR-205ENST00000535739 TBX6O95947 436 aaPredicted RBP19.17■□□□□ 0.66
LTBR-205ENST00000535739 TFEBP19484 476 aa19.17■□□□□ 0.66
LTBR-205ENST00000535739 SSR4P51571 173 aa19.17■□□□□ 0.66
LTBR-205ENST00000535739 KRTAP10-9P60411 292 aa19.17■□□□□ 0.66
LTBR-205ENST00000535739 TGFBIQ15582 683 aa19.17■□□□□ 0.66
LTBR-205ENST00000535739 FBXO48Q5FWF7 155 aa19.17■□□□□ 0.66
LTBR-205ENST00000535739 ADNP2Q6IQ32 1131 aa19.17■□□□□ 0.66
LTBR-205ENST00000535739 CAPN12Q6ZSI9 719 aa19.17■□□□□ 0.66
LTBR-205ENST00000535739 VN1R5Q7Z5H4 357 aa19.17■□□□□ 0.66
LTBR-205ENST00000535739 CLNKQ7Z7G1 428 aa19.17■□□□□ 0.66
LTBR-205ENST00000535739 EID3Q8N140 333 aa19.17■□□□□ 0.66
LTBR-205ENST00000535739 KRT78Q8N1N4 520 aa19.17■□□□□ 0.66
LTBR-205ENST00000535739 SPATA6LQ8N4H0 392 aa19.17■□□□□ 0.66
LTBR-205ENST00000535739 ZFP62Q8NB50 900 aaPredicted RBP19.17■□□□□ 0.66
LTBR-205ENST00000535739 SREK1Q8WXA9 508 aaKnown RBP19.17■□□□□ 0.66
LTBR-205ENST00000535739 RUNDC3BQ96NL0 473 aa19.17■□□□□ 0.66
LTBR-205ENST00000535739 CCDC77Q9BR77 488 aa19.17■□□□□ 0.66
LTBR-205ENST00000535739 TMEM79Q9BSE2 394 aa19.17■□□□□ 0.66
LTBR-205ENST00000535739 MCMBPQ9BTE3 642 aa19.17■□□□□ 0.66
LTBR-205ENST00000535739 REXO4Q9GZR2 422 aaKnown RBP19.17■□□□□ 0.66
LTBR-205ENST00000535739 RHOJQ9H4E5 214 aa19.17■□□□□ 0.66
LTBR-205ENST00000535739 L2HGDHQ9H9P8 463 aa19.17■□□□□ 0.66
LTBR-205ENST00000535739 SMYD2Q9NRG4 433 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms