RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 CSAG2Q9Y5P2 127 aa12.97□□□□□ -0.33
TMEM258-203ENST00000535297 IQANK1A0A1B0GTG1 560 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 TCRBV16S1A1N1A0A5B0 115 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 DYTNA2CJ06 578 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 SYNDIG1LA6NDD5 238 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 LRRC14BA6NHZ5 514 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 SIX3O95343 332 aaPredicted RBP12.96□□□□□ -0.33
TMEM258-203ENST00000535297 MYBL2P10244 700 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 CERS1P27544 350 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 EEF1DP29692 281 aaKnown RBP12.96□□□□□ -0.33
TMEM258-203ENST00000535297 PIK3CBP42338 1070 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 TSFMP43897 325 aaKnown RBP12.96□□□□□ -0.33
TMEM258-203ENST00000535297 ARG2P78540 354 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 BTG2P78543 158 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 PHEXP78562 749 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 RUNX2Q13950 521 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 SLC29A2Q14542 456 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 ZNF169Q14929 603 aaPredicted RBP12.96□□□□□ -0.33
TMEM258-203ENST00000535297 ABHD17BQ5VST6 288 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 LCA5Q86VQ0 697 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 MYLK4Q86YV6 388 aaPredicted RBP12.96□□□□□ -0.33
TMEM258-203ENST00000535297 SCUBE1Q8IWY4 988 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.96□□□□□ -0.33
TMEM258-203ENST00000535297 REPS1Q96D71 796 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 CMTM7Q96FZ5 175 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 CNDP1Q96KN2 507 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 F2RL3Q96RI0 385 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 TBCDQ9BTW9 1192 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 IPPKQ9H8X2 491 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 PRM3Q9NNZ6 103 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 PRDM7Q9NQW5 492 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 PSMC3IPQ9P2W1 217 aaPredicted RBP12.96□□□□□ -0.33
TMEM258-203ENST00000535297 PCDHGA11Q9Y5H2 935 aa12.96□□□□□ -0.33
TMEM258-203ENST00000535297 SAGE2PA6NJ88 616 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 FAM227AF5H4B4 570 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 H0YIV9 168 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 CLDN4O14493 209 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 VPS4BO75351 444 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 SCELO95171 688 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 MAOAP21397 527 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 LIM2P55344 173 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 HSD17B7P56937 341 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 SLC26A5P58743 744 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 KHDRBS2Q5VWX1 349 aaKnown RBP12.95□□□□□ -0.34
TMEM258-203ENST00000535297 H3F3CQ6NXT2 135 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 CHSY3Q70JA7 882 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 ZNF595Q8IYB9 648 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 L3MBTL4Q8NA19 623 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 HAS2Q92819 552 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 SNRNP40Q96DI7 357 aaKnown RBP12.95□□□□□ -0.34
TMEM258-203ENST00000535297 PHF21BQ96EK2 531 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 CCDC77Q9BR77 488 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 CENPKQ9BS16 269 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 KCNK13Q9HB14 408 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 LYRM4Q9HD34 91 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 DMRT3Q9NQL9 472 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 NECTIN3Q9NQS3 549 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 PRTFDC1Q9NRG1 225 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 PCTPQ9UKL6 214 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 DAPP1Q9UN19 280 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 VPS4AQ9UN37 437 aa12.95□□□□□ -0.34
TMEM258-203ENST00000535297 FLNCQ14315 2725 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 BLACEA4D250 179 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 ZIC2O95409 532 aaPredicted RBP12.94□□□□□ -0.34
TMEM258-203ENST00000535297 TGFB1P01137 390 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 RPS17P08708 135 aaKnown RBP12.94□□□□□ -0.34
TMEM258-203ENST00000535297 HIST1H1TP22492 207 aaPredicted RBP12.94□□□□□ -0.34
TMEM258-203ENST00000535297 ATP5A1P25705 553 aaKnown RBP12.94□□□□□ -0.34
TMEM258-203ENST00000535297 TNFSF10P50591 281 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 ARFIP1P53367 373 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 TAS2R50P59544 299 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 ZNF33BQ06732 778 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 DDX39BQ13838 428 aaKnown RBP12.94□□□□□ -0.34
TMEM258-203ENST00000535297 TERF2Q15554 542 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 AP5B1Q2VPB7 878 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 C10orf62Q5T681 223 aaPredicted RBP12.94□□□□□ -0.34
TMEM258-203ENST00000535297 DEPDC1Q5TB30 811 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 ZNF793Q6ZN11 406 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 UBE3DQ7Z6J8 389 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 LGI4Q8N135 537 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 SLC5A8Q8N695 610 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 FAM47BQ8NA70 645 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 HUS1BQ8NHY5 278 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 ACMSDQ8TDX5 336 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 ZNF354BQ96LW1 612 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 CSF3RQ99062 836 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 NTMT1Q9BV86 223 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 NOL11Q9H8H0 719 aaKnown RBP12.94□□□□□ -0.34
TMEM258-203ENST00000535297 PPCSQ9HAB8 311 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 MAP10Q9P2G4 905 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 PPT2Q9UMR5 302 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 COPG1Q9Y678 874 aaKnown RBP12.94□□□□□ -0.34
TMEM258-203ENST00000535297 SPACA6W5XKT8 324 aa12.94□□□□□ -0.34
TMEM258-203ENST00000535297 LRRK2Q5S007 2527 aa12.93□□□□□ -0.34
TMEM258-203ENST00000535297 TRAV17A0A0B4J275 112 aa12.93□□□□□ -0.34
TMEM258-203ENST00000535297 A8MT66 165 aa12.93□□□□□ -0.34
TMEM258-203ENST00000535297 CYR61O00622 381 aa12.93□□□□□ -0.34
TMEM258-203ENST00000535297 OR7A17O14581 309 aa12.93□□□□□ -0.34
TMEM258-203ENST00000535297 CLDN9O95484 217 aa12.93□□□□□ -0.34
TMEM258-203ENST00000535297 WDPCPO95876 746 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms