RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 LAPTM4BQ86VI4 370 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 CEP295NLQ96MC4 621 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 SORBS1Q9BX66 1292 aaKnown RBP15.25■□□□□ 0.03
MCF2L-232ENST00000535094 NMNAT1Q9HAN9 279 aaPredicted RBP15.25■□□□□ 0.03
MCF2L-232ENST00000535094 CFAP97Q9P2B7 532 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 MBD1Q9UIS9 605 aaPredicted RBP15.25■□□□□ 0.03
MCF2L-232ENST00000535094 CORO2BQ9UQ03 480 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 NAALAD2Q9Y3Q0 740 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 NEUROG3Q9Y4Z2 214 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 NYNRINQ9P2P1 1898 aaKnown RBP15.25■□□□□ 0.03
MCF2L-232ENST00000535094 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.25■□□□□ 0.03
MCF2L-232ENST00000535094 YY2O15391 372 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 SLC28A2O43868 658 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 NR2F6P10588 404 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 CRISP1P54107 249 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 CXorf57Q6NSI4 855 aaKnown RBP15.25■□□□□ 0.03
MCF2L-232ENST00000535094 CRTC1Q6UUV9 634 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 CEACAM20Q6UY09 585 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 Q6ZVU0 165 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 RNF180Q86T96 592 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 RTN4RL1Q86UN2 441 aaPredicted RBP15.25■□□□□ 0.03
MCF2L-232ENST00000535094 IL17RDQ8NFM7 739 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 TP53INP1Q96A56 240 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 TESCQ96BS2 214 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 WACQ9BTA9 647 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 ZNF282Q9UDV7 671 aaPredicted RBP15.25■□□□□ 0.03
MCF2L-232ENST00000535094 SEC14L3Q9UDX4 400 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 ZNF222Q9UK12 451 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 RTCAO00442 366 aaKnown RBP15.25■□□□□ 0.03
MCF2L-232ENST00000535094 SLC16A8O95907 504 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 GASTP01350 101 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 CSTF2P33240 577 aaKnown RBP eCLIP15.25■□□□□ 0.03
MCF2L-232ENST00000535094 BUD31P41223 144 aaPredicted RBP15.25■□□□□ 0.03
MCF2L-232ENST00000535094 KCNJ10P78508 379 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 CDC20Q12834 499 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 SLBPQ14493 270 aaKnown RBP eCLIP15.25■□□□□ 0.03
MCF2L-232ENST00000535094 DDI2Q5TDH0 399 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 OLIG3Q7RTU3 272 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 GLCCI1Q86VQ1 547 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 TSSK6Q9BXA6 273 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 B4GALT6Q9UBX8 382 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 GPR52Q9Y2T5 361 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 CMAHPQ9Y471 501 aa15.25■□□□□ 0.03
MCF2L-232ENST00000535094 HOXC11O43248 304 aaPredicted RBP15.24■□□□□ 0.03
MCF2L-232ENST00000535094 NME6O75414 186 aaPredicted RBP15.24■□□□□ 0.03
MCF2L-232ENST00000535094 ATP1B2P14415 290 aaPredicted RBP15.24■□□□□ 0.03
MCF2L-232ENST00000535094 JUPP14923 745 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 GPX2P18283 190 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 CTSOP43234 321 aaPredicted RBP15.24■□□□□ 0.03
MCF2L-232ENST00000535094 TCEA2Q15560 299 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 ZNF367Q7RTV3 350 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 DDX53Q86TM3 631 aaKnown RBP15.24■□□□□ 0.03
MCF2L-232ENST00000535094 POP5Q969H6 163 aaKnown RBP15.24■□□□□ 0.03
MCF2L-232ENST00000535094 TMED9Q9BVK6 235 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 ZNF226Q9NYT6 803 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 ZNF624Q9P2J8 865 aaPredicted RBP15.24■□□□□ 0.03
MCF2L-232ENST00000535094 YARS2Q9Y2Z4 477 aaKnown RBP15.24■□□□□ 0.03
MCF2L-232ENST00000535094 PRAMEF33A0A0G2JMD5 474 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 SCAMP2O15127 329 aaKnown RBP15.24■□□□□ 0.03
MCF2L-232ENST00000535094 PRAMEF10O60809 474 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 ALPPL2P10696 532 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 SLC2A2P11168 524 aaPredicted RBP15.24■□□□□ 0.03
MCF2L-232ENST00000535094 CHMP24386 653 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 CNTN1Q12860 1018 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 BTBD16Q32M84 506 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 CFAP206Q8IYR0 622 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 TRPV1Q8NER1 839 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 PCNPQ8WW12 178 aaKnown RBP15.24■□□□□ 0.03
MCF2L-232ENST00000535094 GEMIN6Q8WXD5 167 aaKnown RBP15.24■□□□□ 0.03
MCF2L-232ENST00000535094 ARMC5Q96C12 935 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 TM9SF2Q99805 663 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 LINC00597Q9H2U6 94 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 TMEM245Q9H330 911 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 FAM83DQ9H4H8 585 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 STARD7Q9NQZ5 370 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 KLHL1Q9NR64 748 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 PDCD11Q14690 1871 aaKnown RBP15.24■□□□□ 0.03
MCF2L-232ENST00000535094 LRRTM2O43300 516 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 GNG2P59768 71 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 MLLT1Q03111 559 aaPredicted RBP15.24■□□□□ 0.03
MCF2L-232ENST00000535094 SLC5A12Q1EHB4 618 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 PLAG1Q6DJT9 500 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 LHFPL3Q86UP9 236 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 ELMOD2Q8IZ81 293 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 FAM46DQ8NEK8 389 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 FLCNQ8NFG4 579 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 GATAD2BQ8WXI9 593 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 EPYCQ99645 322 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 FBXL12Q9NXK8 326 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 GABRQQ9UN88 632 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 MAN2B2Q9Y2E5 1009 aa15.24■□□□□ 0.03
MCF2L-232ENST00000535094 SDK1Q7Z5N4 2213 aa15.23■□□□□ 0.03
MCF2L-232ENST00000535094 PLD2O14939 933 aa15.23■□□□□ 0.03
MCF2L-232ENST00000535094 ETHE1O95571 254 aa15.23■□□□□ 0.03
MCF2L-232ENST00000535094 NR2F1P10589 423 aa15.23■□□□□ 0.03
MCF2L-232ENST00000535094 SDC2P34741 201 aa15.23■□□□□ 0.03
MCF2L-232ENST00000535094 MAGEA2P43356 314 aa15.23■□□□□ 0.03
MCF2L-232ENST00000535094 CCDC58Q4VC31 144 aa15.23■□□□□ 0.03
MCF2L-232ENST00000535094 FRMPD2BQ6IN97 320 aa15.23■□□□□ 0.03
MCF2L-232ENST00000535094 MED27Q6P2C8 311 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms