RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 SORT1Q99523 831 aa12.4□□□□□ -0.42
TMEM258-202ENST00000535042 MESP1Q9BRJ9 268 aa12.4□□□□□ -0.42
TMEM258-202ENST00000535042 MRPL1Q9BYD6 325 aaKnown RBP12.4□□□□□ -0.42
TMEM258-202ENST00000535042 RBCK1Q9BYM8 510 aa12.4□□□□□ -0.42
TMEM258-202ENST00000535042 FAM117AQ9C073 453 aa12.4□□□□□ -0.42
TMEM258-202ENST00000535042 TGIF2Q9GZN2 237 aa12.4□□□□□ -0.42
TMEM258-202ENST00000535042 TUBB1Q9H4B7 451 aa12.4□□□□□ -0.42
TMEM258-202ENST00000535042 BRF2Q9HAW0 419 aa12.4□□□□□ -0.42
TMEM258-202ENST00000535042 EML4Q9HC35 981 aaKnown RBP12.4□□□□□ -0.42
TMEM258-202ENST00000535042 FIS1Q9Y3D6 152 aa12.4□□□□□ -0.42
TMEM258-202ENST00000535042 TRAF6Q9Y4K3 522 aa12.4□□□□□ -0.42
TMEM258-202ENST00000535042 PTGDR2Q9Y5Y4 395 aa12.4□□□□□ -0.42
TMEM258-202ENST00000535042 ASPMQ8IZT6 3477 aa12.4□□□□□ -0.42
TMEM258-202ENST00000535042 FREM2Q5SZK8 3169 aa12.4□□□□□ -0.42
TMEM258-202ENST00000535042 SERTM1A2A2V5 107 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 ZNF891A8MT65 544 aaPredicted RBP12.39□□□□□ -0.43
TMEM258-202ENST00000535042 ATP8B1O43520 1251 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 B3GALT2O43825 422 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 SEMA3DO95025 777 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 HSPA4LO95757 839 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 RECKO95980 971 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 PRKAR1AP10644 381 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 HSD3B1P14060 373 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 GRK2P25098 689 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 HSD3B2P26439 372 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 FOLR3P41439 243 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 SSR2P43308 183 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 SLC1A6P48664 564 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 TMPRSS3P57727 454 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 ZNF33BQ06732 778 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 VAC14Q08AM6 782 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 CSTF3Q12996 717 aaKnown RBP12.39□□□□□ -0.43
TMEM258-202ENST00000535042 AP5B1Q2VPB7 878 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 SH2D4BQ5SQS7 431 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 NIPAL1Q6NVV3 410 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 CLYBLQ8N0X4 340 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 METTL4Q8N3J2 472 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 ADAMTS17Q8TE56 1095 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 MAPKAP1Q9BPZ7 522 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 NPLQ9BXD5 320 aaPredicted RBP12.39□□□□□ -0.43
TMEM258-202ENST00000535042 DDX31Q9H8H2 851 aaKnown RBP12.39□□□□□ -0.43
TMEM258-202ENST00000535042 COPS7BQ9H9Q2 264 aaPredicted RBP12.39□□□□□ -0.43
TMEM258-202ENST00000535042 CLK4Q9HAZ1 481 aaKnown RBP12.39□□□□□ -0.43
TMEM258-202ENST00000535042 LANCL2Q9NS86 450 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 KCMF1Q9P0J7 381 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 NXT1Q9UKK6 140 aaKnown RBP12.39□□□□□ -0.43
TMEM258-202ENST00000535042 PADI2Q9Y2J8 665 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 CCL27Q9Y4X3 112 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 DNAJC15Q9Y5T4 150 aa12.39□□□□□ -0.43
TMEM258-202ENST00000535042 A0A088AWK7 358 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 A0A0A6YYD5 115 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 CDC14CA4D256 554 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 TMPRSS11DO60235 418 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 CDC123O75794 336 aaPredicted RBP12.38□□□□□ -0.43
TMEM258-202ENST00000535042 GBAP04062 536 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 CD63P08962 238 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 ZNF10P21506 573 aaPredicted RBP12.38□□□□□ -0.43
TMEM258-202ENST00000535042 TPP2P29144 1249 aaPredicted RBP12.38□□□□□ -0.43
TMEM258-202ENST00000535042 HNRNPFP52597 415 aaKnown RBP12.38□□□□□ -0.43
TMEM258-202ENST00000535042 ARFIP1P53367 373 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 UCNP55089 124 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 LIM2P55344 173 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 SKP1P63208 163 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 CXADRP78310 365 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 CDC20Q12834 499 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 SLAMF1Q13291 335 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 SSPNQ14714 243 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 UGT8Q16880 541 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 MRM1Q6IN84 353 aaKnown RBP12.38□□□□□ -0.43
TMEM258-202ENST00000535042 TRIM46Q7Z4K8 759 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 PPP1R32Q7Z5V6 425 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 ZCCHC7Q8N3Z6 543 aaKnown RBP12.38□□□□□ -0.43
TMEM258-202ENST00000535042 ZNF781Q8N8C0 355 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 GBP7Q8N8V2 638 aaPredicted RBP12.38□□□□□ -0.43
TMEM258-202ENST00000535042 TMEM52Q8NDY8 209 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 OR2T11Q8NH01 316 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 CHTF18Q8WVB6 975 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 TBC1D20Q96BZ9 403 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 APIPQ96GX9 242 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 CSF3RQ99062 836 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 CENPKQ9BS16 269 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 CRB3Q9BUF7 120 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 ROGDIQ9GZN7 287 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 C14orf105Q9NVL8 296 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 VPS29Q9UBQ0 182 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 C3orf18Q9UK00 162 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 MKL2Q9ULH7 1088 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 DAPP1Q9UN19 280 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 SCN3AQ9NY46 2000 aa12.38□□□□□ -0.43
TMEM258-202ENST00000535042 MAP1BP46821 2468 aaKnown RBP12.37□□□□□ -0.43
TMEM258-202ENST00000535042 IDSB3KWA1 339 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 CYR61O00622 381 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 DYNC1I1O14576 645 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 B4GALT2O60909 372 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 SNNO75324 88 aaPredicted RBP12.37□□□□□ -0.43
TMEM258-202ENST00000535042 KLK1P06870 262 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 FHP07954 510 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 LINC00032P0C843 101 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 RNH1P13489 461 aaKnown RBP12.37□□□□□ -0.43
TMEM258-202ENST00000535042 NR1D1P20393 614 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms