RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 ELAVL4P26378 380 aaKnown RBP13.17□□□□□ -0.3
SF3B2-215ENST00000534307 IRF9Q00978 393 aa13.17□□□□□ -0.3
SF3B2-215ENST00000534307 ACTN3Q08043 901 aaPredicted RBP13.17□□□□□ -0.3
SF3B2-215ENST00000534307 TUBA3CQ13748 450 aa13.17□□□□□ -0.3
SF3B2-215ENST00000534307 XKR6Q5GH73 641 aa13.17□□□□□ -0.3
SF3B2-215ENST00000534307 MROH9Q5TGP6 573 aa13.17□□□□□ -0.3
SF3B2-215ENST00000534307 ABHD17CQ6PCB6 329 aa13.17□□□□□ -0.3
SF3B2-215ENST00000534307 TUBA3EQ6PEY2 450 aa13.17□□□□□ -0.3
SF3B2-215ENST00000534307 ZGRF1Q86YA3 2104 aa13.17□□□□□ -0.3
SF3B2-215ENST00000534307 LGI4Q8N135 537 aa13.17□□□□□ -0.3
SF3B2-215ENST00000534307 ARMC10Q8N2F6 343 aa13.17□□□□□ -0.3
SF3B2-215ENST00000534307 MDS2Q8NDY4 140 aa13.17□□□□□ -0.3
SF3B2-215ENST00000534307 RHEBL1Q8TAI7 183 aa13.17□□□□□ -0.3
SF3B2-215ENST00000534307 KCTD4Q8WVF5 259 aa13.17□□□□□ -0.3
SF3B2-215ENST00000534307 NR4A3Q92570 626 aa13.17□□□□□ -0.3
SF3B2-215ENST00000534307 NXNL1Q96CM4 212 aa13.17□□□□□ -0.3
SF3B2-215ENST00000534307 ZNF354BQ96LW1 612 aa13.17□□□□□ -0.3
SF3B2-215ENST00000534307 GPR78Q96P69 363 aa13.17□□□□□ -0.3
SF3B2-215ENST00000534307 REXO4Q9GZR2 422 aaKnown RBP13.17□□□□□ -0.3
SF3B2-215ENST00000534307 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.17□□□□□ -0.3
SF3B2-215ENST00000534307 SNX15Q9NRS6 342 aa13.17□□□□□ -0.3
SF3B2-215ENST00000534307 OLAHQ9NV23 265 aa13.17□□□□□ -0.3
SF3B2-215ENST00000534307 ACOT9Q9Y305 439 aa13.17□□□□□ -0.3
SF3B2-215ENST00000534307 MMACHCQ9Y4U1 282 aa13.17□□□□□ -0.3
SF3B2-215ENST00000534307 PCDHGB6Q9Y5F9 930 aa13.17□□□□□ -0.3
SF3B2-215ENST00000534307 MED13LQ71F56 2210 aa13.17□□□□□ -0.3
SF3B2-215ENST00000534307 A0A087X1B8 175 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 ANKDD1BA6NHY2 528 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 TGFBR3LH3BV60 316 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 K7EPI3 171 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 PSMD12O00232 456 aaPredicted RBP13.16□□□□□ -0.3
SF3B2-215ENST00000534307 CYR61O00622 381 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 KLK8O60259 260 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 CCNT2O60583 730 aaKnown RBP13.16□□□□□ -0.3
SF3B2-215ENST00000534307 ALDOAP04075 364 aaKnown RBP13.16□□□□□ -0.3
SF3B2-215ENST00000534307 S100BP04271 92 aaPredicted RBP13.16□□□□□ -0.3
SF3B2-215ENST00000534307 UQCRHP07919 91 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 HNRNPFP52597 415 aaKnown RBP13.16□□□□□ -0.3
SF3B2-215ENST00000534307 PLA2G16P53816 162 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 IRF8Q02556 426 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 CHIT1Q13231 466 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 LAPTM5Q13571 262 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 ELOAQ14241 798 aaKnown RBP13.16□□□□□ -0.3
SF3B2-215ENST00000534307 MEP1AQ16819 746 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 UBE3DQ7Z6J8 389 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 LAS2Q8IYD9 372 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 KIF2BQ8N4N8 673 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 SLC5A8Q8N695 610 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 TMEM52Q8NDY8 209 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 CCT6BQ92526 530 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 ISL2Q96A47 359 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 FAR2Q96K12 515 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 SIGLEC12Q96PQ1 595 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 CDC42EP4Q9H3Q1 356 aaKnown RBP13.16□□□□□ -0.3
SF3B2-215ENST00000534307 PRDM7Q9NQW5 492 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 PPIEQ9UNP9 301 aaKnown RBP13.16□□□□□ -0.3
SF3B2-215ENST00000534307 SLC5A6Q9Y289 635 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 CCDC168Q8NDH2 2452 aa13.16□□□□□ -0.3
SF3B2-215ENST00000534307 SUPT3HB4E1H0 165 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 CDK2AP1O14519 115 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 B3GALT2O43825 422 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 SUPT3HO75486 399 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 KLHL2O95198 593 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 MST1P26927 711 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 HPDP32754 393 aaPredicted RBP13.15□□□□□ -0.3
SF3B2-215ENST00000534307 PHBP35232 272 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 CD96P40200 585 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 MAGEA12P43365 314 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 HSD17B7P56937 341 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 RAB38P57729 211 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 NAA30Q147X3 362 aaPredicted RBP13.15□□□□□ -0.3
SF3B2-215ENST00000534307 SETDB1Q15047 1291 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 TERF2Q15554 542 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 FAM83EQ2M2I3 478 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 PAGE2BQ5JRK9 111 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 C1QL3Q5VWW1 255 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 TRIM40Q6P9F5 258 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 CEP128Q6ZU80 1094 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 SRRM1Q8IYB3 904 aaKnown RBP13.15□□□□□ -0.3
SF3B2-215ENST00000534307 APCDD1LQ8NCL9 501 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 ADAMTS18Q8TE60 1221 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 ZNF473Q8WTR7 871 aaKnown RBP13.15□□□□□ -0.3
SF3B2-215ENST00000534307 SLC44A1Q8WWI5 657 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 MRRFQ96E11 262 aaKnown RBP13.15□□□□□ -0.3
SF3B2-215ENST00000534307 SCMH1Q96GD3 660 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 MAGEB10Q96LZ2 347 aaPredicted RBP13.15□□□□□ -0.3
SF3B2-215ENST00000534307 PHF12Q96QT6 1004 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 F2RL3Q96RI0 385 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 SERINC2Q96SA4 455 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 MS4A8Q9BY19 250 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 KCMF1Q9P0J7 381 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 ABI3Q9P2A4 366 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 OPTCQ9UBM4 332 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 MTRF1LQ9UGC7 380 aaKnown RBP13.15□□□□□ -0.3
SF3B2-215ENST00000534307 DAPP1Q9UN19 280 aa13.15□□□□□ -0.3
SF3B2-215ENST00000534307 A0A088AWK7 358 aa13.14□□□□□ -0.31
SF3B2-215ENST00000534307 A0A096LPK6 155 aa13.14□□□□□ -0.31
SF3B2-215ENST00000534307 GABRR3A8MPY1 467 aa13.14□□□□□ -0.31
SF3B2-215ENST00000534307 SYCE1LA8MT33 242 aa13.14□□□□□ -0.31
SF3B2-215ENST00000534307 NEURL1O76050 574 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms