RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 NBPF19A0A087WUL8 3843 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 ARHGAP10A1A4S6 786 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 FCHO1O14526 889 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 CCNT2O60583 730 aaKnown RBP8.32□□□□□ -1.08
COPB1-211ENST00000534234 FAM155BO75949 473 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 C1QAP02745 245 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 GSTA2P09210 222 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 ESRRAP11474 423 aaPredicted RBP8.32□□□□□ -1.08
COPB1-211ENST00000534234 CASQ1P31415 396 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 TRHRP34981 398 aaPredicted RBP8.32□□□□□ -1.08
COPB1-211ENST00000534234 MAGEA4P43358 317 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 RAB38P57729 211 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 IRF8Q02556 426 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 CAV1Q03135 178 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 C2orf54Q08AI8 447 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 CHIT1Q13231 466 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 ZKSCAN8Q15776 578 aaPredicted RBP8.32□□□□□ -1.08
COPB1-211ENST00000534234 C3AR1Q16581 482 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 PDK4Q16654 411 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 HIST2H2ACQ16777 129 aaPredicted RBP8.32□□□□□ -1.08
COPB1-211ENST00000534234 ADPRMQ3LIE5 342 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 KBTBD12Q3ZCT8 623 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 HIST2H2AA3Q6FI13 130 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 ADNP2Q6IQ32 1131 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 TRIM40Q6P9F5 258 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 ABHD17CQ6PCB6 329 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 VN1R5Q7Z5H4 357 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 CCDC25Q86WR0 208 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 ZNF227Q86WZ6 799 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 SCUBE1Q8IWY4 988 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 ZNF595Q8IYB9 648 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 ARMC10Q8N2F6 343 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 ZNF808Q8N4W9 903 aaPredicted RBP8.32□□□□□ -1.08
COPB1-211ENST00000534234 PPM1NQ8N819 430 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 APCDD1LQ8NCL9 501 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 TMEM52Q8NDY8 209 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 STAG3L4Q8TBR4 150 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 MARVELD3Q96A59 401 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 KIAA1191Q96A73 305 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 TMEM125Q96AQ2 219 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 MAGED4Q96JG8 741 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 FRMD6Q96NE9 622 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 QRFPRQ96P65 431 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 F2RL3Q96RI0 385 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 SERINC2Q96SA4 455 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 EFCAB11Q9BUY7 163 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 CD244Q9BZW8 370 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 TRIM45Q9H8W5 580 aaPredicted RBP8.32□□□□□ -1.08
COPB1-211ENST00000534234 PRDM7Q9NQW5 492 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 TINAGQ9UJW2 476 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 FBXW2Q9UKT8 454 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 RNF112Q9ULX5 631 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 MRPS33Q9Y291 106 aaKnown RBP8.32□□□□□ -1.08
COPB1-211ENST00000534234 HEATR5BQ9P2D3 2071 aa8.32□□□□□ -1.08
COPB1-211ENST00000534234 MDC1Q14676 2089 aaKnown RBP8.32□□□□□ -1.08
COPB1-211ENST00000534234 TRBV11-1A0A0K0K1C0 115 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 TGFBR3LH3BV60 316 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 CYR61O00622 381 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 NME2P1O60361 137 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 CTNSO60931 367 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 S100BP04271 92 aaPredicted RBP8.31□□□□□ -1.08
COPB1-211ENST00000534234 CD22P20273 847 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 NME2P22392 152 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 CERS1P27544 350 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 PPP2R1BP30154 601 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 GMPRP36959 345 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 GPR143P51810 404 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 HNRNPFP52597 415 aaKnown RBP8.31□□□□□ -1.08
COPB1-211ENST00000534234 MTTPP55157 894 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 LIM2P55344 173 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 ETF1P62495 437 aaKnown RBP8.31□□□□□ -1.08
COPB1-211ENST00000534234 TGM3Q08188 693 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 LAPTM5Q13571 262 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 RCN2Q14257 317 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 TERF2Q15554 542 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 TRADDQ15628 312 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 PAGE2BQ5JRK9 111 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 RNFT1Q5M7Z0 435 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 XKRXQ6PP77 449 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 RAPH1Q70E73 1250 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 CLNKQ7Z7G1 428 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 ISCA2Q86U28 154 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 SIAH3Q8IW03 269 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 TMEM156Q8N614 296 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 CPSF7Q8N684 471 aaKnown RBP8.31□□□□□ -1.08
COPB1-211ENST00000534234 FAM47BQ8NA70 645 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 PDPRQ8NCN5 879 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 FBXO25Q8TCJ0 367 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 ADAMTS18Q8TE60 1221 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 EXT2Q93063 718 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 WDR34Q96EX3 536 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 VMP1Q96GC9 406 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 RAB17Q9H0T7 212 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 ALG9Q9H6U8 611 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 RUBCNLQ9H714 662 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 COPS7BQ9H9Q2 264 aaPredicted RBP8.31□□□□□ -1.08
COPB1-211ENST00000534234 NMRAL1Q9HBL8 299 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 PRM3Q9NNZ6 103 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 DAPP1Q9UN19 280 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 PPIEQ9UNP9 301 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms