RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 ZNF407Q9C0G0 2248 aa8.21□□□□□ -1.09
COPB1-210ENST00000533533 IGHV1-45A0A0A0MS14 117 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 A0A1W2PPM1 405 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 LRRC14BA6NHZ5 514 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 FOXO6A8MYZ6 492 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 IDSB3KWA1 339 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 K7EPI3 171 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 PRPF4O43172 522 aaKnown RBP eCLIP8.21□□□□□ -1.16e-8■■■■■ 28.1
COPB1-210ENST00000533533 WFS1O76024 890 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 BMP10O95393 424 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 WDPCPO95876 746 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 F10P00742 488 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 CRYABP02511 175 aaKnown RBP8.21□□□□□ -1.1
COPB1-210ENST00000533533 SNRPB2P08579 225 aaKnown RBP8.21□□□□□ -1.1
COPB1-210ENST00000533533 PCNAP12004 261 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 EPB42P16452 691 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 IL1RNP18510 177 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 MST1P26927 711 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 GGT5P36269 586 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 CA7P43166 264 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 MAGEA12P43365 314 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 AVPR1BP47901 424 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 EMP2P54851 167 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 ALDH18A1P54886 795 aaKnown RBP8.21□□□□□ -1.1
COPB1-210ENST00000533533 REEP5Q00765 189 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 RELAQ04206 551 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 EEF1A2Q05639 463 aaKnown RBP8.21□□□□□ -1.1
COPB1-210ENST00000533533 RGS1Q08116 209 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 CHIT1Q13231 466 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 HIST2H2ACQ16777 129 aaPredicted RBP8.21□□□□□ -1.1
COPB1-210ENST00000533533 PRTGQ2VWP7 1150 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 MFSD4BQ5TF39 518 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 HIST2H2AA3Q6FI13 130 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 MTFR2Q6P444 385 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 TIFABQ6ZNK6 161 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 RIPOR1Q6ZS17 1223 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 VN1R4Q7Z5H5 301 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 CCDC63Q8NA47 563 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 KCT2Q8NC54 265 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 OR4K1Q8NGD4 311 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 DNAJB8Q8NHS0 232 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 AENQ8WTP8 325 aaKnown RBP8.21□□□□□ -1.1
COPB1-210ENST00000533533 ATP6V1E2Q96A05 226 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 ISL2Q96A47 359 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 ZBTB9Q96C00 473 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 C10orf90Q96M02 699 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 GPR78Q96P69 363 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 MRPL57Q9BQC6 102 aaKnown RBP8.21□□□□□ -1.1
COPB1-210ENST00000533533 DRC3Q9H069 523 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 RNF32Q9H0A6 362 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 MRPL46Q9H2W6 279 aaKnown RBP8.21□□□□□ -1.1
COPB1-210ENST00000533533 ANKHQ9HCJ1 492 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 RIC8BQ9NVN3 520 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 GPRC5BQ9NZH0 403 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 ABI3Q9P2A4 366 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 TRPC4Q9UBN4 977 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 SEC14L3Q9UDX4 400 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 FETUBQ9UGM5 382 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 ASB1Q9Y576 335 aa8.21□□□□□ -1.1
COPB1-210ENST00000533533 KCNE1BA0A087WTH5 132 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 CCDC189A1A4V9 331 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 ZNF860A6NHJ4 632 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 ANKDD1BA6NHY2 528 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 CDH16O75309 829 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 RASAL1O95294 804 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 SIX3O95343 332 aaPredicted RBP8.2□□□□□ -1.1
COPB1-210ENST00000533533 UQCRHP07919 91 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 CELA2AP08217 269 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 MTHFD2P13995 350 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 COX6B1P14854 86 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 TAC1P20366 129 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 EEF1DP29692 281 aaKnown RBP8.2□□□□□ -1.1
COPB1-210ENST00000533533 SCTRP47872 440 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 AP2B1P63010 937 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 MAT1AQ00266 395 aaKnown RBP8.2□□□□□ -1.1
COPB1-210ENST00000533533 SRSF11Q05519 484 aaKnown RBP8.2□□□□□ -1.1
COPB1-210ENST00000533533 DDX39BQ13838 428 aaKnown RBP8.2□□□□□ -1.1
COPB1-210ENST00000533533 GTF2H2Q13888 395 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 DOC2AQ14183 400 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 SETDB1Q15047 1291 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 SYT16Q17RD7 645 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 PAGE2BQ5JRK9 111 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 TOR1AIP1Q5JTV8 583 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 GARNL3Q5VVW2 1013 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 GTF2H2CQ6P1K8 395 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 XKRXQ6PP77 449 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 TMIGD1Q6UXZ0 262 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 SLCO4C1Q6ZQN7 724 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.2□□□□□ -1.1
COPB1-210ENST00000533533 KLHDC8AQ8IYD2 350 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 CYP4X1Q8N118 509 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 C4orf33Q8N1A6 199 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 ANKRD53Q8N9V6 530 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 TRPV3Q8NET8 790 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 OR9A4Q8NGU2 314 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 CAVIN3Q969G5 261 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 MVB12AQ96EY5 273 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 PTCD3Q96EY7 689 aaKnown RBP8.2□□□□□ -1.1
COPB1-210ENST00000533533 TRIM8Q9BZR9 551 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 ACTR8Q9H981 624 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms