RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 SOX17Q9H6I2 414 aaPredicted RBP16.52■□□□□ 0.24
NXF1-216ENST00000533499 LRTM1Q9HBL6 345 aa16.52■□□□□ 0.24
NXF1-216ENST00000533499 SLC22A11Q9NSA0 550 aa16.52■□□□□ 0.24
NXF1-216ENST00000533499 RIC8BQ9NVN3 520 aa16.52■□□□□ 0.24
NXF1-216ENST00000533499 ZNF282Q9UDV7 671 aaPredicted RBP16.52■□□□□ 0.24
NXF1-216ENST00000533499 ACSL6Q9UKU0 697 aa16.52■□□□□ 0.24
NXF1-216ENST00000533499 PPT2Q9UMR5 302 aa16.52■□□□□ 0.24
NXF1-216ENST00000533499 MAP4K5Q9Y4K4 846 aa16.52■□□□□ 0.24
NXF1-216ENST00000533499 GNG14A0A1W2PPG7 69 aa16.51■□□□□ 0.23
NXF1-216ENST00000533499 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.51■□□□□ 0.23
NXF1-216ENST00000533499 PEX11AO75192 247 aa16.51■□□□□ 0.23
NXF1-216ENST00000533499 CDC123O75794 336 aaPredicted RBP16.51■□□□□ 0.23
NXF1-216ENST00000533499 JUNP05412 331 aaKnown RBP16.51■□□□□ 0.23
NXF1-216ENST00000533499 BSGP35613 385 aa16.51■□□□□ 0.23
NXF1-216ENST00000533499 RPS18P62269 152 aaKnown RBP16.51■□□□□ 0.23
NXF1-216ENST00000533499 RPL38P63173 70 aaKnown RBP16.51■□□□□ 0.23
NXF1-216ENST00000533499 CLN3Q13286 438 aa16.51■□□□□ 0.23
NXF1-216ENST00000533499 ERV3-1Q14264 604 aa16.51■□□□□ 0.23
NXF1-216ENST00000533499 NCF4Q15080 339 aa16.51■□□□□ 0.23
NXF1-216ENST00000533499 MINDY4Q4G0A6 757 aa16.51■□□□□ 0.23
NXF1-216ENST00000533499 VWA2Q5GFL6 755 aa16.51■□□□□ 0.23
NXF1-216ENST00000533499 FAM69BQ5VUD6 431 aa16.51■□□□□ 0.23
NXF1-216ENST00000533499 COX15Q7KZN9 410 aa16.51■□□□□ 0.23
NXF1-216ENST00000533499 OVCH1Q7RTY7 1134 aa16.51■□□□□ 0.23
NXF1-216ENST00000533499 TRIM46Q7Z4K8 759 aa16.51■□□□□ 0.23
NXF1-216ENST00000533499 SHISA5Q8N114 240 aa16.51■□□□□ 0.23
NXF1-216ENST00000533499 CA13Q8N1Q1 262 aa16.51■□□□□ 0.23
NXF1-216ENST00000533499 METTL4Q8N3J2 472 aa16.51■□□□□ 0.23
NXF1-216ENST00000533499 OR2T11Q8NH01 316 aa16.51■□□□□ 0.23
NXF1-216ENST00000533499 PIWIL2Q8TC59 973 aaKnown RBP16.51■□□□□ 0.23
NXF1-216ENST00000533499 ZCCHC14Q8WYQ9 949 aaKnown RBP16.51■□□□□ 0.23
NXF1-216ENST00000533499 MIEF2Q96C03 454 aa16.51■□□□□ 0.23
NXF1-216ENST00000533499 C7orf26Q96N11 449 aa16.51■□□□□ 0.23
NXF1-216ENST00000533499 PADI2Q9Y2J8 665 aa16.51■□□□□ 0.23
NXF1-216ENST00000533499 PTRH2Q9Y3E5 179 aaKnown RBP16.51■□□□□ 0.23
NXF1-216ENST00000533499 POLR3HQ9Y535 204 aaPredicted RBP16.51■□□□□ 0.23
NXF1-216ENST00000533499 SPACA6W5XKT8 324 aa16.51■□□□□ 0.23
NXF1-216ENST00000533499 CCDC88CQ9P219 2028 aa16.51■□□□□ 0.23
NXF1-216ENST00000533499 PCDH7O60245 1069 aa16.5■□□□□ 0.23
NXF1-216ENST00000533499 B4GALT2O60909 372 aa16.5■□□□□ 0.23
NXF1-216ENST00000533499 JRKO75564 520 aa16.5■□□□□ 0.23
NXF1-216ENST00000533499 RSL1D1O76021 490 aaKnown RBP16.5■□□□□ 0.23
NXF1-216ENST00000533499 RNH1P13489 461 aaKnown RBP16.5■□□□□ 0.23
NXF1-216ENST00000533499 CPN2P22792 545 aa16.5■□□□□ 0.23
NXF1-216ENST00000533499 MAPK12P53778 367 aa16.5■□□□□ 0.23
NXF1-216ENST00000533499 TBL3Q12788 808 aaKnown RBP16.5■□□□□ 0.23
NXF1-216ENST00000533499 ATP6AP1LQ52LC2 224 aa16.5■□□□□ 0.23
NXF1-216ENST00000533499 SPIN4Q56A73 249 aa16.5■□□□□ 0.23
NXF1-216ENST00000533499 VWA5B1Q5TIE3 1220 aa16.5■□□□□ 0.23
NXF1-216ENST00000533499 NXNQ6DKJ4 435 aa16.5■□□□□ 0.23
NXF1-216ENST00000533499 DTX1Q86Y01 620 aa16.5■□□□□ 0.23
NXF1-216ENST00000533499 WDR75Q8IWA0 830 aaKnown RBP16.5■□□□□ 0.23
NXF1-216ENST00000533499 FAM47BQ8NA70 645 aa16.5■□□□□ 0.23
NXF1-216ENST00000533499 STT3BQ8TCJ2 826 aa16.5■□□□□ 0.23
NXF1-216ENST00000533499 PPP3R2Q96LZ3 170 aa16.5■□□□□ 0.23
NXF1-216ENST00000533499 C3orf30Q96M34 536 aa16.5■□□□□ 0.23
NXF1-216ENST00000533499 MAPKAP1Q9BPZ7 522 aa16.5■□□□□ 0.23
NXF1-216ENST00000533499 MKKSQ9NPJ1 570 aaPredicted RBP16.5■□□□□ 0.23
NXF1-216ENST00000533499 C1orf109Q9NX04 203 aa16.5■□□□□ 0.23
NXF1-216ENST00000533499 VTI1BQ9UEU0 232 aa16.5■□□□□ 0.23
NXF1-216ENST00000533499 HAO1Q9UJM8 370 aa16.5■□□□□ 0.23
NXF1-216ENST00000533499 FARSAQ9Y285 508 aaKnown RBP16.5■□□□□ 0.23
NXF1-216ENST00000533499 RAXQ9Y2V3 346 aa16.5■□□□□ 0.23
NXF1-216ENST00000533499 APC2O95996 2303 aa16.5■□□□□ 0.23
NXF1-216ENST00000533499 ACACAQ13085 2346 aa16.5■□□□□ 0.23
NXF1-216ENST00000533499 GOLGA8QA0A0J9YX86 632 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 SERTM1A2A2V5 107 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 GOLGA8OA6NCC3 632 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 TRPC5OSA6NMA1 111 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 FAM227AF5H4B4 570 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 GOLGA8NF8WBI6 632 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 SLCO1B7G3V0H7 640 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 HDAC3O15379 428 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 RRP8O43159 456 aaKnown RBP16.49■□□□□ 0.23
NXF1-216ENST00000533499 DIAPH2O60879 1101 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 FAM58BPP0C7Q3 252 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 LIFP15018 202 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 FOLR3P41439 243 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 LIM2P55344 173 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 SF3A3Q12874 501 aaKnown RBP eCLIP16.49■□□□□ 0.23
NXF1-216ENST00000533499 SRSF6Q13247 344 aaKnown RBP16.49■□□□□ 0.23
NXF1-216ENST00000533499 NKG7Q16617 165 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 FAAH2Q6GMR7 532 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 LRRC69Q6ZNQ3 347 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 RIPOR1Q6ZS17 1223 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 Q6ZSR9 355 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 SNIP1Q8TAD8 396 aaKnown RBP16.49■□□□□ 0.23
NXF1-216ENST00000533499 CHTF18Q8WVB6 975 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 FKBP10Q96AY3 582 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 CCT7Q99832 543 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 C1orf50Q9BV19 199 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 NPLQ9BXD5 320 aaPredicted RBP16.49■□□□□ 0.23
NXF1-216ENST00000533499 TMEM121BQ9BXQ6 578 aaPredicted RBP16.49■□□□□ 0.23
NXF1-216ENST00000533499 DDX31Q9H8H2 851 aaKnown RBP16.49■□□□□ 0.23
NXF1-216ENST00000533499 LYARQ9NX58 379 aaKnown RBP16.49■□□□□ 0.23
NXF1-216ENST00000533499 IL17BQ9UHF5 180 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 MRPS18BQ9Y676 258 aaKnown RBP16.49■□□□□ 0.23
NXF1-216ENST00000533499 USH1CQ9Y6N9 552 aa16.49■□□□□ 0.23
NXF1-216ENST00000533499 TMPRSS11DO60235 418 aa16.48■□□□□ 0.23
NXF1-216ENST00000533499 HEXBP07686 556 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms