RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 ABHD13Q7L211 337 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 MDGA2Q7Z553 956 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 STRA8Q7Z7C7 330 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 C17orf64Q86WR6 236 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 CYP4X1Q8N118 509 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 FAM109AQ8N4B1 249 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 CCDC89Q8N998 374 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 MFSD9Q8NBP5 474 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 ZNF740Q8NDX6 193 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 WFDC11Q8NEX6 87 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 OR2M7Q8NG81 312 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 OR5T3Q8NGG3 340 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 SPATA3Q8NHX4 192 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 NUDT8Q8WV74 236 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 C1orf54Q8WWF1 131 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 IFT81Q8WYA0 676 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 KCNJ9Q92806 393 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 FAM136AQ96C01 138 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 MACROD1Q9BQ69 325 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 REPIN1Q9BWE0 567 aaKnown RBP11.57□□□□□ -0.56
CAPN1-223ENST00000533079 TTTY12Q9BZ98 90 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 DEFB127Q9H1M4 99 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 DMRT3Q9NQL9 472 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 ZDHHC18Q9NUE0 388 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 PAK5Q9P286 719 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 CBLCQ9ULV8 474 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 PPIEQ9UNP9 301 aaKnown RBP11.57□□□□□ -0.56
CAPN1-223ENST00000533079 YARS2Q9Y2Z4 477 aaKnown RBP11.57□□□□□ -0.56
CAPN1-223ENST00000533079 PCDHGB3Q9Y5G1 929 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 INTS1Q8N201 2190 aaKnown RBP11.57□□□□□ -0.56
CAPN1-223ENST00000533079 A8MVJ9 347 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 PSMD12O00232 456 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-223ENST00000533079 NDUFS4O43181 175 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 GLSO94925 669 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-223ENST00000533079 VAPBO95292 243 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 IVDP26440 423 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 NMBRP28336 390 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 ASCL1P50553 236 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 DAZAP2Q15038 168 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-223ENST00000533079 OASLQ15646 514 aaKnown RBP11.56□□□□□ -0.56
CAPN1-223ENST00000533079 FBXL19-AS1Q494R0 122 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 C1orf185Q5T7R7 199 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 WLSQ5T9L3 541 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 LRRC8EQ6NSJ5 796 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 WDR53Q7Z5U6 358 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-223ENST00000533079 TBC1D19Q8N5T2 526 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 GPATCH11Q8N954 259 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 OR5M9Q8NGP3 310 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 SARAFQ96BY9 339 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 VMP1Q96GC9 406 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 SMR3AQ99954 134 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 CCDC77Q9BR77 488 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 KIFC1Q9BW19 673 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 NEUROD4Q9HD90 331 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 DEPPQ9NTK1 212 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 HPF1Q9NWY4 346 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 GRHL1Q9NZI5 618 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 BFARQ9NZS9 450 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 KCMF1Q9P0J7 381 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 ERVK-11Q9UQG0 969 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 CRYL1Q9Y2S2 319 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 ACANP16112 2415 aa11.56□□□□□ -0.56
CAPN1-223ENST00000533079 ESYT3A0FGR9 886 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 URADA6NGE7 173 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 HSPB2A8KAH6 182 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 FAM166BA8MTA8 275 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 SYT5O00445 386 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 CHST10O43529 356 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 B4GALT2O60909 372 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 IFNB1P01574 187 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 RNH1P13489 461 aaKnown RBP11.55□□□□□ -0.56
CAPN1-223ENST00000533079 PAMP19021 973 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 MAOAP21397 527 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 ADH7P40394 386 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 KCNJ1P48048 391 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 NPY2RP49146 381 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 SESN2P58004 480 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-223ENST00000533079 RGS1Q08116 209 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 PPP1R7Q15435 360 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 TRADDQ15628 312 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 HSPB2Q16082 182 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 HYAL4Q2M3T9 481 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 DEFB134Q4QY38 66 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 SHEQ5VZ18 495 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 FBXW10Q5XX13 1052 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 RTL6Q6ICC9 239 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 KIAA0930Q6ICG6 404 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-223ENST00000533079 LCTLQ6UWM7 567 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 UBE2R2Q712K3 238 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-223ENST00000533079 TRILQ7L0X0 811 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 CILP2Q8IUL8 1156 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 LIX1LQ8IVB5 337 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 CCDC138Q96M89 665 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 PWWP2AQ96N64 755 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 FAM173AQ9BQD7 235 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 HAUS8Q9BT25 410 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 TXLNGYQ9BZA5 131 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 CCDC68Q9H2F9 335 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 IL1RL2Q9HB29 575 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 MED4Q9NPJ6 270 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms