RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 VN1R5Q7Z5H4 357 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 CRLF3Q8IUI8 442 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 BEST3Q8N1M1 668 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 TEX9Q8N6V9 391 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 CEP112Q8N8E3 955 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 ADAMTS18Q8TE60 1221 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 UBTD2Q8WUN7 234 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 PSMG3-AS1Q96PY0 264 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 F2RL3Q96RI0 385 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 SERINC2Q96SA4 455 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 UTP23Q9BRU9 249 aaKnown RBP16.16■□□□□ 0.18
PHRF1-204ENST00000532550 FUT8Q9BYC5 575 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 VPS11Q9H270 941 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 NECTIN3Q9NQS3 549 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 PRTFDC1Q9NRG1 225 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 OLAHQ9NV23 265 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 ICE1Q9Y2F5 2266 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 A8MUA0 341 aa16.15■□□□□ 0.18
PHRF1-204ENST00000532550 PRAMEF2O60811 474 aa16.15■□□□□ 0.18
PHRF1-204ENST00000532550 RASAL1O95294 804 aa16.15■□□□□ 0.18
PHRF1-204ENST00000532550 TBX6O95947 436 aaPredicted RBP16.15■□□□□ 0.18
PHRF1-204ENST00000532550 ALDOAP04075 364 aaKnown RBP16.15■□□□□ 0.18
PHRF1-204ENST00000532550 PCNAP12004 261 aa16.15■□□□□ 0.18
PHRF1-204ENST00000532550 MTHFD2P13995 350 aa16.15■□□□□ 0.18
PHRF1-204ENST00000532550 SERPINB9P50453 376 aa16.15■□□□□ 0.18
PHRF1-204ENST00000532550 HSD17B7P56937 341 aa16.15■□□□□ 0.18
PHRF1-204ENST00000532550 ADNP2Q6IQ32 1131 aa16.15■□□□□ 0.18
PHRF1-204ENST00000532550 TAOK1Q7L7X3 1001 aa16.15■□□□□ 0.18
PHRF1-204ENST00000532550 RPS19BP1Q86WX3 136 aaKnown RBP16.15■□□□□ 0.18
PHRF1-204ENST00000532550 ELP5Q8TE02 316 aa16.15■□□□□ 0.18
PHRF1-204ENST00000532550 SLC44A1Q8WWI5 657 aa16.15■□□□□ 0.18
PHRF1-204ENST00000532550 TRIM44Q96DX7 344 aaPredicted RBP16.15■□□□□ 0.18
PHRF1-204ENST00000532550 QRFPRQ96P65 431 aa16.15■□□□□ 0.18
PHRF1-204ENST00000532550 KCNC2Q96PR1 638 aa16.15■□□□□ 0.18
PHRF1-204ENST00000532550 ROGDIQ9GZN7 287 aa16.15■□□□□ 0.18
PHRF1-204ENST00000532550 CDCP1Q9H5V8 836 aa16.15■□□□□ 0.18
PHRF1-204ENST00000532550 IGKV3D-11A0A0A0MRZ8 115 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 SAGE2PA6NJ88 616 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 POC1B-GALNT4F8VUJ3 575 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 KRT38O76015 456 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 DDAH2O95865 285 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 TGFB1P01137 390 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 CRYABP02511 175 aaKnown RBP16.14■□□□□ 0.17
PHRF1-204ENST00000532550 GP1BBP13224 206 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 CD96P40200 585 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 ALDH18A1P54886 795 aaKnown RBP16.14■□□□□ 0.17
PHRF1-204ENST00000532550 LIM2P55344 173 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 PCDH1Q08174 1060 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 SLC13A2Q13183 592 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 TUBA3CQ13748 450 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 E2F2Q14209 437 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 SETDB1Q15047 1291 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 TMEM35AQ53FP2 167 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 ZNF766Q5HY98 468 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 UBAP2Q5T6F2 1119 aaKnown RBP16.14■□□□□ 0.17
PHRF1-204ENST00000532550 TUBA3EQ6PEY2 450 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 ZNF595Q8IYB9 648 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 LAS2Q8IYD9 372 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 HORMAD2Q8N7B1 307 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 OR7G3Q8NG95 312 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 DNAJB8Q8NHS0 232 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 ZNF473Q8WTR7 871 aaKnown RBP16.14■□□□□ 0.17
PHRF1-204ENST00000532550 TAAR6Q96RI8 345 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 TBCDQ9BTW9 1192 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 PRDM7Q9NQW5 492 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 PNO1Q9NRX1 252 aaKnown RBP16.14■□□□□ 0.17
PHRF1-204ENST00000532550 CPSF2Q9P2I0 782 aaKnown RBP16.14■□□□□ 0.17
PHRF1-204ENST00000532550 ADGRE2Q9UHX3 823 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 DAPP1Q9UN19 280 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 SLC5A6Q9Y289 635 aa16.14■□□□□ 0.17
PHRF1-204ENST00000532550 TNPO3Q9Y5L0 923 aaKnown RBP16.14■□□□□ 0.17
PHRF1-204ENST00000532550 A0A087WUV0 522 aaPredicted RBP16.13■□□□□ 0.17
PHRF1-204ENST00000532550 CDK2AP1O14519 115 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 KLK8O60259 260 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 SH3BGRLO75368 114 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 RBP1P09455 135 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 CERS1P27544 350 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 SERPINB1P30740 379 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 OC90Q02509 493 aaPredicted RBP16.13■□□□□ 0.17
PHRF1-204ENST00000532550 NAA30Q147X3 362 aaPredicted RBP16.13■□□□□ 0.17
PHRF1-204ENST00000532550 AP5B1Q2VPB7 878 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 LIPJQ5W064 366 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 GRHL2Q6ISB3 625 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 MYLK4Q86YV6 388 aaPredicted RBP16.13■□□□□ 0.17
PHRF1-204ENST00000532550 IFT20Q8IY31 132 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 LGI4Q8N135 537 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 KIF2BQ8N4N8 673 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 FAM47BQ8NA70 645 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 UHMK1Q8TAS1 419 aaKnown RBP16.13■□□□□ 0.17
PHRF1-204ENST00000532550 CMTM7Q96FZ5 175 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 C5orf34Q96MH7 638 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 GPR78Q96P69 363 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 PAFAH2Q99487 392 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 NPAS2Q99743 824 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 SLX1AQ9BQ83 275 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 MS4A8Q9BY19 250 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 DEFB126Q9BYW3 111 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 ACTR8Q9H981 624 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 ANKRD10Q9NXR5 420 aa16.13■□□□□ 0.17
PHRF1-204ENST00000532550 ERRFI1Q9UJM3 462 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms