RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 PLPP1O14494 284 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 UBFD1O14562 309 aaKnown RBP13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 B4GALT2O60909 372 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 CDC123O75794 336 aaPredicted RBP13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 OR4F21O95013 312 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 HPP00738 406 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 C8orf89P0DMQ9 161 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 RNH1P13489 461 aaKnown RBP13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 PTX3P26022 381 aaPredicted RBP13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 BSGP35613 385 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 ARFIP1P53367 373 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 MTTPP55157 894 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 LIM2P55344 173 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 DNAJB13P59910 316 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 SKP1P63208 163 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 EEF1A2Q05639 463 aaKnown RBP13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 IFFO1Q0D2I5 559 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 AIMP2Q13155 320 aaKnown RBP13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 CUL3Q13618 768 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 DDX39BQ13838 428 aaKnown RBP13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 MYBPC3Q14896 1274 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 MINDY4Q4G0A6 757 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 BEND6Q5SZJ8 279 aaPredicted RBP13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 FRG2Q64ET8 278 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 CHSY3Q70JA7 882 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 MILR1Q7Z6M3 343 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 MYLK4Q86YV6 388 aaPredicted RBP13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 ACOT4Q8N9L9 421 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 RDH11Q8TC12 318 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 ATP6V1E2Q96A05 226 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 APOPT1Q96IL0 206 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 FAR2Q96K12 515 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 ZIM3Q96PE6 472 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 KCNC2Q96PR1 638 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 FRG2BQ96QU4 278 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 ZNF382Q96SR6 550 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 SLC25A23Q9BV35 468 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 NECTIN3Q9NQS3 549 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 FARSBQ9NSD9 589 aaKnown RBP13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 OXSMQ9NWU1 459 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 TRPS1Q9UHF7 1281 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 B3GALT2O43825 422 aa13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 TYROBPO43914 113 aa13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 OTCP00480 354 aa13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 CELA2AP08217 269 aa13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 MYL2P10916 166 aa13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 CPA3P15088 417 aa13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 HIST1H1TP22492 207 aaPredicted RBP13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 HPDP32754 393 aaPredicted RBP13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 RAB38P57729 211 aa13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 PCLAFQ15004 111 aa13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 LACTB2Q53H82 288 aaPredicted RBP13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 OR4C11Q6IEV9 310 aa13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 MRM1Q6IN84 353 aaKnown RBP13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 QSOX2Q6ZRP7 698 aa13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 CPEB2Q7Z5Q1 589 aaKnown RBP13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 SCUBE1Q8IWY4 988 aa13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 PARP9Q8IXQ6 854 aa13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 SRRM1Q8IYB3 904 aaKnown RBP13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 CLEC1AQ8NC01 280 aa13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 SRFBP1Q8NEF9 429 aaKnown RBP13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 RGMAQ96B86 450 aa13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 REPS1Q96D71 796 aa13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 MTFMTQ96DP5 389 aaKnown RBP13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 CCDC126Q96EE4 140 aa13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 CSF3RQ99062 836 aa13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 MAPKAP1Q9BPZ7 522 aa13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 ZBTB20Q9HC78 741 aaPredicted RBP13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 ZNF160Q9HCG1 818 aa13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 TNFRSF12AQ9NP84 129 aa13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 SLC17A7Q9P2U7 560 aa13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 PCDHGB7Q9Y5F8 929 aa13.1□□□□□ -0.31
TSPAN4-220ENST00000532375 NSG1A0A0A6YYJ2 146 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 TCRBV16S1A1N1A0A5B0 115 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 CCDC151A5D8V7 595 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 B8ZZF3 427 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 PRMT3O60678 531 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 SPAG7O75391 227 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 EEDO75530 441 aaKnown RBP13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 MAOAP21397 527 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 TSFMP43897 325 aaKnown RBP13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 NAGLUP54802 743 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 TGM3Q08188 693 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 NFATC3Q12968 1075 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 RAPSNQ13702 412 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 ABRAXAS2Q15018 415 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 NSDHLQ15738 373 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 KRT71Q3SY84 523 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 TCHHL1Q5QJ38 904 aaPredicted RBP13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 C10orf62Q5T681 223 aaPredicted RBP13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 IGFL2Q6UWQ7 119 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 ASB18Q6ZVZ8 466 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 EXOC3L1Q86VI1 746 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 PTRH1Q86Y79 214 aaKnown RBP13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 CPAMD8Q8IZJ3 1885 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 ZCCHC7Q8N3Z6 543 aaKnown RBP13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 ARMC2Q8NEN0 867 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 AGAP11Q8TF27 550 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 PTCHD1Q96NR3 888 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 DDX31Q9H8H2 851 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms