RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 AIF1LQ9BQI0 150 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 TRIM4Q9C037 500 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 ZDHHC5Q9C0B5 715 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 YIPF3Q9GZM5 350 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 RBM38Q9H0Z9 239 aaKnown RBP5.33□□□□□ -1.56
PCF11-205ENST00000530906 TRIT1Q9H3H1 467 aaKnown RBP5.33□□□□□ -1.56
PCF11-205ENST00000530906 MTG2Q9H4K7 406 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 TMEM38AQ9H6F2 299 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 WDR26Q9H7D7 661 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 MVB12BQ9H7P6 319 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 NTN4Q9HB63 628 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 PREBQ9HCU5 417 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 TM9SF3Q9HD45 589 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 ADPRHL2Q9NX46 363 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 ZSCAN32Q9NX65 697 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 TMEM9Q9P0T7 183 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 GULP1Q9UBP9 304 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 ENOPH1Q9UHY7 261 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 MBD1Q9UIS9 605 aaPredicted RBP5.33□□□□□ -1.56
PCF11-205ENST00000530906 FZD4Q9ULV1 537 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 SUFUQ9UMX1 484 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 ICKQ9UPZ9 632 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 ITM2BQ9Y287 266 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 ASF1AQ9Y294 204 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 HEBP2Q9Y5Z4 205 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 STON1Q9Y6Q2 735 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 PCM1Q15154 2024 aa5.33□□□□□ -1.56
PCF11-205ENST00000530906 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.32□□□□□ -1.56
PCF11-205ENST00000530906 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.32□□□□□ -1.56
PCF11-205ENST00000530906 C1orf226A1L170 272 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 FAM149AA5PLN7 773 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 ANKDD1BA6NHY2 528 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 TOR1BO14657 336 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 ADAMDEC1O15204 470 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 NOBOXO60393 691 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 UGT2B11O75310 529 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 GUCY1B2O75343 617 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 E2F6O75461 281 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 PRKD3O94806 890 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 KCNK5O95279 499 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 SERPINA1P01009 418 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 SEMG1P04279 462 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 CCDC159P0C7I6 412 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 ITGAMP11215 1152 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 PCNAP12004 261 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 MYCLP1P12525 358 aaPredicted RBP5.32□□□□□ -1.56
PCF11-205ENST00000530906 HLA-EP13747 358 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 ITGA2P17301 1181 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 ENGP17813 658 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 EN2P19622 333 aaPredicted RBP5.32□□□□□ -1.56
PCF11-205ENST00000530906 FPR1P21462 350 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 IDSP22304 550 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 NDUFS1P28331 727 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 PDHA2P29803 388 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 PBLDP30039 288 aaPredicted RBP5.32□□□□□ -1.56
PCF11-205ENST00000530906 DNAJA1P31689 397 aaKnown RBP5.32□□□□□ -1.56
PCF11-205ENST00000530906 KDELR2P33947 212 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 RYKP34925 604 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 DRD3P35462 400 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 TSFMP43897 325 aaKnown RBP5.32□□□□□ -1.56
PCF11-205ENST00000530906 HLCSP50747 726 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 CDK9P50750 372 aaKnown RBP5.32□□□□□ -1.56
PCF11-205ENST00000530906 CCR8P51685 355 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 CLCNKAP51800 687 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 ITGA1P56199 1179 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 RPS13P62277 151 aaKnown RBP5.32□□□□□ -1.56
PCF11-205ENST00000530906 CSNK2BP67870 215 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 RAE1P78406 368 aaKnown RBP5.32□□□□□ -1.56
PCF11-205ENST00000530906 ABATP80404 500 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 REEP5Q00765 189 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 MESP2Q0VG99 397 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 SGCGQ13326 291 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 DDX39BQ13838 428 aaKnown RBP5.32□□□□□ -1.56
PCF11-205ENST00000530906 KEAP1Q14145 624 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 ZNF630Q2M218 657 aaPredicted RBP5.32□□□□□ -1.56
PCF11-205ENST00000530906 AAK1Q2M2I8 961 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 ZBED5Q49AG3 693 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 NADK2Q4G0N4 442 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 TMEM35AQ53FP2 167 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 FBLN7Q53RD9 439 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 THEMIS2Q5TEJ8 643 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 NAIF1Q69YI7 327 aaPredicted RBP5.32□□□□□ -1.56
PCF11-205ENST00000530906 TANGO2Q6ICL3 276 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 OR2T5Q6IEZ7 315 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 FAM71E1Q6IPT2 247 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 ZCCHC8Q6NZY4 707 aaKnown RBP5.32□□□□□ -1.56
PCF11-205ENST00000530906 SLC23A3Q6PIS1 610 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 DOK6Q6PKX4 331 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 DNAJC14Q6Y2X3 702 aaPredicted RBP5.32□□□□□ -1.56
PCF11-205ENST00000530906 ZNF621Q6ZSS3 439 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 USP30Q70CQ3 517 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 CCDC80Q76M96 950 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 GET4Q7L5D6 327 aaPredicted RBP5.32□□□□□ -1.56
PCF11-205ENST00000530906 COMMD6Q7Z4G1 85 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 THAP5Q7Z6K1 395 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 RBM23Q86U06 439 aaKnown RBP5.32□□□□□ -1.56
PCF11-205ENST00000530906 STK32CQ86UX6 486 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 HEATR4Q86WZ0 1026 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 FAM129CQ86XR2 697 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 MMAAQ8IVH4 418 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms