RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 ALAS2P22557 587 aa11.52□□□□□ -0.57
TRAF3IP2-211ENST00000528599 CERS1P27544 350 aa11.52□□□□□ -0.57
TRAF3IP2-211ENST00000528599 TIA1P31483 386 aaKnown RBP eCLIP11.52□□□□□ -0.57
TRAF3IP2-211ENST00000528599 ARSFP54793 590 aa11.52□□□□□ -0.57
TRAF3IP2-211ENST00000528599 RAB15P59190 212 aa11.52□□□□□ -0.57
TRAF3IP2-211ENST00000528599 ERVK-8P63133 956 aa11.52□□□□□ -0.57
TRAF3IP2-211ENST00000528599 EMX2Q04743 252 aa11.52□□□□□ -0.57
TRAF3IP2-211ENST00000528599 C1orf189Q5VU69 101 aa11.52□□□□□ -0.57
TRAF3IP2-211ENST00000528599 OGFOD2Q6N063 350 aa11.52□□□□□ -0.57
TRAF3IP2-211ENST00000528599 RHBDD2Q6NTF9 364 aa11.52□□□□□ -0.57
TRAF3IP2-211ENST00000528599 NOXRED1Q6NXP6 359 aa11.52□□□□□ -0.57
TRAF3IP2-211ENST00000528599 RIPOR1Q6ZS17 1223 aa11.52□□□□□ -0.57
TRAF3IP2-211ENST00000528599 NUDT13Q86X67 352 aa11.52□□□□□ -0.57
TRAF3IP2-211ENST00000528599 GATA6Q92908 595 aa11.52□□□□□ -0.57
TRAF3IP2-211ENST00000528599 METTL2AQ96IZ6 378 aaKnown RBP11.52□□□□□ -0.57
TRAF3IP2-211ENST00000528599 DDA1Q9BW61 102 aa11.52□□□□□ -0.57
TRAF3IP2-211ENST00000528599 EBPLQ9BY08 206 aa11.52□□□□□ -0.57
TRAF3IP2-211ENST00000528599 POLR1BQ9H9Y6 1135 aa11.52□□□□□ -0.57
TRAF3IP2-211ENST00000528599 ANKHQ9HCJ1 492 aa11.52□□□□□ -0.57
TRAF3IP2-211ENST00000528599 NDOR1Q9UHB4 597 aa11.52□□□□□ -0.57
TRAF3IP2-211ENST00000528599 SRPK3Q9UPE1 567 aa11.52□□□□□ -0.57
TRAF3IP2-211ENST00000528599 MSRB2Q9Y3D2 182 aa11.52□□□□□ -0.57
TRAF3IP2-211ENST00000528599 NEUROG3Q9Y4Z2 214 aa11.52□□□□□ -0.57
TRAF3IP2-211ENST00000528599 ANKRD65E5RJM6 399 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 E9PBE3 544 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 PCDH7O60245 1069 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 KLHL41O60662 606 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 RDH16O75452 317 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 TNFSF15O95150 251 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 NSA2O95478 260 aaKnown RBP11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 BCKDHAP12694 445 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 TACR1P25103 407 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 TSFMP43897 325 aaKnown RBP11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 DIO3P55073 304 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 MTTPP55157 894 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 GABREP78334 506 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 OLR1P78380 273 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 RUNX2Q13950 521 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 SMU1Q2TAY7 513 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 CCNYL2Q5T2Q4 361 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 IL23RQ5VWK5 629 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 PAGE2Q7Z2X7 111 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 ZCCHC7Q8N3Z6 543 aaKnown RBP11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 OR5T3Q8NGG3 340 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 CLIP3Q96DZ5 547 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 MMABQ96EY8 250 aaPredicted RBP11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 MARK4Q96L34 752 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 RILPQ96NA2 401 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 GBP5Q96PP8 586 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 SERINC2Q96SA4 455 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 ASPSCR1Q9BZE9 553 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 COPS7BQ9H9Q2 264 aaPredicted RBP11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 TXLNGQ9NUQ3 528 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 MCM8Q9UJA3 840 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 ADAM29Q9UKF5 820 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 G3BP2Q9UN86 482 aaKnown RBP11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 TMED5Q9Y3A6 229 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 PCDHGA8Q9Y5G5 932 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 PCDHGA3Q9Y5H0 932 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 MAU2Q9Y6X3 613 aa11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 MAP1BP46821 2468 aaKnown RBP11.51□□□□□ -0.57
TRAF3IP2-211ENST00000528599 A0A1B0GX78 115 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 C1QTNF9BB2RNN3 333 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 CPNE3O75131 537 aaKnown RBP11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 DCTN3O75935 186 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 DNAJC8O75937 253 aaPredicted RBP11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 MYO1DO94832 1006 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 HBQ1P09105 142 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 ANXA4P09525 319 aaPredicted RBP11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 C1QTNF9P0C862 333 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 ATXN8OSP0DMR3 200 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 SDC1P18827 310 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 RORAP35398 523 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 OR1D4P47884 311 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 BNIP1Q12981 228 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 SLAMF1Q13291 335 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 ZNF385CQ66K41 422 aaPredicted RBP11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 MRM1Q6IN84 353 aaKnown RBP11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 SPATA19Q7Z5L4 167 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 MVB12AQ96EY5 273 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 ZPBPQ9BS86 351 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 ULBP3Q9BZM4 244 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 SPRY4Q9C004 299 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 SLC7A5P2Q9GIP4 190 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 ROGDIQ9GZN7 287 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 AKIRIN1Q9H9L7 192 aaPredicted RBP11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 ASIC5Q9NY37 505 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 KCMF1Q9P0J7 381 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 FOXJ2Q9P0K8 574 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 BAIAP2L1Q9UHR4 511 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 ASB4Q9Y574 426 aa11.5□□□□□ -0.57
TRAF3IP2-211ENST00000528599 USP24Q9UPU5 2620 aa11.49□□□□□ -0.57
TRAF3IP2-211ENST00000528599 DSPP15924 2871 aaKnown RBP11.49□□□□□ -0.57
TRAF3IP2-211ENST00000528599 A0A088AWK7 358 aa11.49□□□□□ -0.57
TRAF3IP2-211ENST00000528599 TEX51A0A1B0GUA7 166 aa11.49□□□□□ -0.57
TRAF3IP2-211ENST00000528599 GNG14A0A1W2PPG7 69 aa11.49□□□□□ -0.57
TRAF3IP2-211ENST00000528599 H0YIG0 161 aa11.49□□□□□ -0.57
TRAF3IP2-211ENST00000528599 UBDO15205 165 aa11.49□□□□□ -0.57
TRAF3IP2-211ENST00000528599 CHST10O43529 356 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms