RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 NTRK1P04629 796 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 ITGA2P17301 1181 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 CDH2P19022 906 aaPredicted RBP14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 FPR1P21462 350 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 MVDP53602 400 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 MANFP55145 182 aaKnown RBP14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 PCBP4P57723 403 aaKnown RBP14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 SRP54P61011 504 aaKnown RBP14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 STXBP1P61764 594 aaKnown RBP14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 CYP4F2P78329 520 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 SLC9A5Q14940 896 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 MPEG1Q2M385 716 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 CRB2Q5IJ48 1285 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 ZNF425Q6IV72 752 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 ARL10Q8N8L6 244 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 PSMA8Q8TAA3 256 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 CIDECQ96AQ7 238 aaPredicted RBP14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 NEURL3Q96EH8 262 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 THAP11Q96EK4 314 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 HSH2DQ96JZ2 352 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 KCNC2Q96PR1 638 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 ZNF347Q96SE7 839 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 PHF7Q9BWX1 381 aaPredicted RBP14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 ROGDIQ9GZN7 287 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 TWSG1Q9GZX9 223 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 EPS8L2Q9H6S3 715 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 TBC1D29Q9UFV1 150 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 ANGPT4Q9Y264 503 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 PADI2Q9Y2J8 665 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 A0A0A6YYD5 115 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 IGKV1-8A0A0C4DH67 115 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 FAM221BA6H8Z2 402 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 TRIM64CA6NLI5 447 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 CHURC1-FNTBB4DL54 471 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 UGT2B11O75310 529 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 CHRM5P08912 532 aaPredicted RBP14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 ARAFP10398 606 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 F3P13726 295 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 SSR2P43308 183 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 CLDN2P57739 230 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 RPS15AP62244 130 aaKnown RBP14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 RELAQ04206 551 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 ILF3Q12906 894 aaKnown RBP eCLIP14.07□□□□□ -0.162e-7■■■■□ 19.4
ECHDC1-220ENST00000528402 TOP3AQ13472 1001 aaPredicted RBP14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 SCARB2Q14108 478 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 KIAA0895LQ68EN5 471 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 SPESP1Q6UW49 350 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 ANGPTL8Q6UXH0 198 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 UBE3DQ7Z6J8 389 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 ABI3BPQ7Z7G0 1075 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 ALDH16A1Q8IZ83 802 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 ADGRF3Q8IZF5 1079 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 TSC22D3Q99576 134 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 DPH2Q9BQC3 489 aaPredicted RBP14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 DPH7Q9BTV6 452 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 SRMSQ9H3Y6 488 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 DDX18Q9NVP1 670 aaKnown RBP14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 DNAAF2Q9NVR5 837 aaKnown RBP14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 SCHIP1Q9P0W5 487 aaPredicted RBP14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 KLF15Q9UIH9 416 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 PCDHGB5Q9Y5G0 923 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 ISM1B1AKI9 464 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 PLOD2O00469 737 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 SLC16A6O15403 523 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 MBTPS2O43462 519 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 TNFSF14O43557 240 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 SRFP11831 508 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 EFNA1P20827 205 aaPredicted RBP14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 TTKP33981 857 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 BCL6P41182 706 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 ACTR1BP42025 376 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 ANXA11P50995 505 aaKnown RBP14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 ITGA1P56199 1179 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 ACTR1AP61163 376 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 CDK6Q00534 326 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 RBM48Q5RL73 367 aaKnown RBP14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 SAXO2Q658L1 398 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 BHLHB9Q6PI77 547 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 THAP5Q7Z6K1 395 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 C8orf59Q8N0T1 100 aaPredicted RBP14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 ZNF786Q8N393 782 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 TMEM145Q8NBT3 493 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 OR2L5Q8NG80 312 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 MS4A6EQ96DS6 147 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 PDXPQ96GD0 296 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 EPYCQ99645 322 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 MYOCQ99972 504 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 GSDMCQ9BYG8 508 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 REEP1Q9H902 201 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 SLC6A20Q9NP91 592 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 LHX9Q9NQ69 397 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 GPATCH2Q9NW75 528 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 FAM118AQ9NWS6 357 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 LYARQ9NX58 379 aaKnown RBP14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 PCDHGB3Q9Y5G1 929 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 PCDHGA4Q9Y5G9 962 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 ENTPD2Q9Y5L3 495 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 HSPE1-MOB4S4R3N1 261 aa14.06□□□□□ -0.16
ECHDC1-220ENST00000528402 TMEM247A6NEH6 219 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms