RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	TMEM52	Q8NDY8	209 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	OR7G3	Q8NG95	312 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	HAS2	Q92819	552 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	MAGEB10	Q96LZ2	347 aa	Predicted RBP	11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	SERINC2	Q96SA4	455 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	CSF3R	Q99062	836 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	NPAS2	Q99743	824 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	NPL	Q9BXD5	320 aa	Predicted RBP	11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	TXLNGY	Q9BZA5	131 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	SLC29A3	Q9BZD2	475 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	RNF32	Q9H0A6	362 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	PRDM7	Q9NQW5	492 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	XPR1	Q9UBH6	696 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	MMACHC	Q9Y4U1	282 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	CLDN16	Q9Y5I7	305 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	COPG1	Q9Y678	874 aa	Known RBP	11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	PTPN13	Q12923	2485 aa		11.02	□□□□□ -0.64
PSMC3-205	ENST00000528362	TRAV17	A0A0B4J275	112 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	SAGE2P	A6NJ88	616 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362		A8MUI8	341 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	RTCA	O00442	366 aa	Known RBP	11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	CYR61	O00622	381 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	E2F3	O00716	465 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	MAN1A2	O60476	641 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	SH3BGRL	O75368	114 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	SNRPA	P09012	282 aa	Known RBP	11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	RBP1	P09455	135 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	PCNA	P12004	261 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	COL6A2	P12110	1019 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	SERPINB1	P30740	379 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	LIM2	P55344	173 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	ZNF33B	Q06732	778 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	TSNAXIP1	Q2TAA8	658 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	ACER2	Q5QJU3	275 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	METTL2B	Q6P1Q9	378 aa	Known RBP	11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	MYLK4	Q86YV6	388 aa	Predicted RBP	11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	CYP4X1	Q8N118	509 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	RNF175	Q8N4F7	328 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	KIF2B	Q8N4N8	673 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	FAM26E	Q8N5C1	309 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	NFAM1	Q8NET5	270 aa	Predicted RBP	11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	OR1N1	Q8NGS0	311 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	HUS1B	Q8NHY5	278 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	ADAMTS18	Q8TE60	1221 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	GRHL3	Q8TE85	626 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	UBE2E3	Q969T4	207 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	KCNC2	Q96PR1	638 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	EPB41L4B	Q9H329	900 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	L2HGDH	Q9H9P8	463 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	COPS7B	Q9H9Q2	264 aa	Predicted RBP	11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	KCNK13	Q9HB14	408 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	STMN3	Q9NZ72	180 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	KCMF1	Q9P0J7	381 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	TEKT2	Q9UIF3	430 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	DAPP1	Q9UN19	280 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	ANGPTL3	Q9Y5C1	460 aa		11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	TNPO3	Q9Y5L0	923 aa	Known RBP	11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	USP9X	Q93008	2570 aa	Predicted RBP	11.02	□□□□□ -0.65
PSMC3-205	ENST00000528362	RP1L1	Q8IWN7	2480 aa	Predicted RBP	11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	OR5H15	A6NDH6	313 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	SAP18	O00422	153 aa	Known RBP	11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	SCEL	O95171	688 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	CBX6	O95503	412 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	TGFB1	P01137	390 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	SBK3	P0C264	359 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	MYBL2	P10244	700 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	ATP5A1	P25705	553 aa	Known RBP	11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	EEF1D	P29692	281 aa	Known RBP	11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	PPP2R1B	P30154	601 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	TGM3	Q08188	693 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	DDX39B	Q13838	428 aa	Known RBP	11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	GTF2H2	Q13888	395 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	TMEM35A	Q53FP2	167 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	KHDRBS2	Q5VWX1	349 aa	Known RBP	11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	LIPJ	Q5W064	366 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	RPUSD3	Q6P087	351 aa	Known RBP	11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	GTF2H2C	Q6P1K8	395 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	ADGRD1	Q6QNK2	874 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	TIFAB	Q6ZNK6	161 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	CRLF3	Q8IUI8	442 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	BEST3	Q8N1M1	668 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	TMEM151A	Q8N4L1	468 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	SLC5A8	Q8N695	610 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	ACOT4	Q8N9L9	421 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	L3MBTL4	Q8NA19	623 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	SRFBP1	Q8NEF9	429 aa	Known RBP	11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	ARMC2	Q8NEN0	867 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	ELP5	Q8TE02	316 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	PHF21B	Q96EK2	531 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	CMTM7	Q96FZ5	175 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	SCYL1	Q96KG9	808 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	ZNF354B	Q96LW1	612 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	NSUN5	Q96P11	429 aa	Known RBP	11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	TBCD	Q9BTW9	1192 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	SORBS1	Q9BX66	1292 aa	Known RBP	11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	MRPL46	Q9H2W6	279 aa	Known RBP	11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	OR51B5	Q9H339	312 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	IPPK	Q9H8X2	491 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	ACTR8	Q9H981	624 aa		11.01	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 194.2 ms