RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 TRIM73Q86UV7 250 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 LGI4Q8N135 537 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 C16orf78Q8WTQ4 265 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 SLC7A6OSQ96CW6 309 aaPredicted RBP14.44□□□□□ -0.1
USP47-207ENST00000527733 TMEM45AQ9NWC5 275 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 RIIAD1A6NNX1 92 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 NOBOXO60393 691 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 IL1RNP18510 177 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 ITGA1P56199 1179 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 ENPP2Q13822 863 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 DGUOKQ16854 277 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 CYBRD1Q53TN4 286 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 ALG1LQ6GMV1 187 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 ZZZ3Q8IYH5 903 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 PACRGLQ8N7B6 248 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 ISL2Q96A47 359 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 SLC30A3Q99726 388 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 PITHD1Q9GZP4 211 aaPredicted RBP14.44□□□□□ -0.1
USP47-207ENST00000527733 ZNFX1Q9P2E3 1918 aaKnown RBP14.44□□□□□ -0.1
USP47-207ENST00000527733 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 FHP07954 510 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 HTR1EP28566 365 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 DEFB133Q30KQ1 61 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 HENMT1Q5T8I9 393 aaKnown RBP14.44□□□□□ -0.1
USP47-207ENST00000527733 TMEFF1Q8IYR6 380 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 DEFB123Q8N688 67 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 C7orf57Q8NEG2 295 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 MZB1Q8WU39 189 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 FGF14Q92915 247 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 TMBIM1Q969X1 311 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 METTL2AQ96IZ6 378 aaKnown RBP14.44□□□□□ -0.1
USP47-207ENST00000527733 ZNF570Q96NI8 536 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 CPNE7Q9UBL6 633 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 PRODH2Q9UF12 536 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 MMP17Q9ULZ9 603 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 EMC8O43402 210 aa14.43□□□□□ -0.1
USP47-207ENST00000527733 CDC123O75794 336 aaPredicted RBP14.43□□□□□ -0.1
USP47-207ENST00000527733 ERMP1Q7Z2K6 904 aa14.43□□□□□ -0.1
USP47-207ENST00000527733 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.43□□□□□ -0.1
USP47-207ENST00000527733 SLC34A3Q8N130 599 aa14.43□□□□□ -0.1
USP47-207ENST00000527733 LRRC25Q8N386 305 aaPredicted RBP14.43□□□□□ -0.1
USP47-207ENST00000527733 PELOQ9BRX2 385 aaKnown RBP14.43□□□□□ -0.1
USP47-207ENST00000527733 MKKSQ9NPJ1 570 aaPredicted RBP14.43□□□□□ -0.1
USP47-207ENST00000527733 EPHA6Q9UF33 1036 aa14.43□□□□□ -0.1
USP47-207ENST00000527733 SCDO00767 359 aa14.43□□□□□ -0.1
USP47-207ENST00000527733 EPHA5P54756 1037 aa14.43□□□□□ -0.1
USP47-207ENST00000527733 MED22Q15528 200 aa14.43□□□□□ -0.1
USP47-207ENST00000527733 MIEF2Q96C03 454 aa14.43□□□□□ -0.1
USP47-207ENST00000527733 INSM2Q96T92 566 aaPredicted RBP14.43□□□□□ -0.1
USP47-207ENST00000527733 DMRT3Q9NQL9 472 aa14.43□□□□□ -0.1
USP47-207ENST00000527733 LAMP1P11279 417 aa14.43□□□□□ -0.1
USP47-207ENST00000527733 TRAF3Q13114 568 aa14.43□□□□□ -0.1
USP47-207ENST00000527733 GPR153Q6NV75 609 aa14.43□□□□□ -0.1
USP47-207ENST00000527733 JAZF1Q86VZ6 243 aa14.43□□□□□ -0.1
USP47-207ENST00000527733 PLA2G15Q8NCC3 412 aa14.43□□□□□ -0.1
USP47-207ENST00000527733 PKP2Q99959 881 aa14.43□□□□□ -0.1
USP47-207ENST00000527733 PRRG4Q9BZD6 226 aa14.43□□□□□ -0.1
USP47-207ENST00000527733 PEX12O00623 359 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 KRT8P05787 483 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 ACADLP28330 430 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 OC90Q02509 493 aaPredicted RBP14.42□□□□□ -0.1
USP47-207ENST00000527733 CEACAM7Q14002 265 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 RPE65Q16518 533 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 TTLL10Q6ZVT0 673 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 LARP4Q71RC2 724 aaKnown RBP eCLIP14.42□□□□□ -0.12e-6■■■■□ 26.4
USP47-207ENST00000527733 OR10Q1Q8NGQ4 319 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 OR5K2Q8NHB8 316 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 TRIM8Q9BZR9 551 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 TRNAU1APQ9NX07 287 aaKnown RBP14.42□□□□□ -0.1
USP47-207ENST00000527733 RARRES3Q9UL19 164 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 PCDHB3Q9Y5E6 796 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 hCG_2014768A0A024R1R8 64 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 CXorf51AA0A1B0GTR3 108 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 ELOA3DA6NLF2 546 aaPredicted RBP14.42□□□□□ -0.1
USP47-207ENST00000527733 CAPN14A8MX76 684 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 RGS10O43665 173 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 HEXBP07686 556 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 SRFP11831 508 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 KCNC4Q03721 635 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 CSTF1Q05048 431 aaKnown RBP14.42□□□□□ -0.1
USP47-207ENST00000527733 LPAL2Q16609 132 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 ELOA3BQ3SY89 546 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 C6orf120Q7Z4R8 191 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 NUP43Q8NFH3 380 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 ELOA3Q8NG57 546 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 JSRP1Q96MG2 331 aaPredicted RBP14.42□□□□□ -0.1
USP47-207ENST00000527733 C1QTNF1Q9BXJ1 281 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 C6orf62Q9GZU0 229 aaPredicted RBP14.42□□□□□ -0.1
USP47-207ENST00000527733 SLC6A17Q9H1V8 727 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 CD320Q9NPF0 282 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 SMOXQ9NWM0 555 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 LIPT1Q9Y234 373 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 A0A0J9YY10 115 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 FPR1P21462 350 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 TPMTP51580 245 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 OLR1P78380 273 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 PRDX1Q06830 199 aaKnown RBP14.42□□□□□ -0.1
USP47-207ENST00000527733 CRB2Q5IJ48 1285 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 LINC00471Q8N535 108 aa14.42□□□□□ -0.1
USP47-207ENST00000527733 ADAMTS18Q8TE60 1221 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms