RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 ZNF169Q14929 603 aaPredicted RBP24.75■■□□□ 1.55
TSPAN4-217ENST00000527644 B3GNTL1Q67FW5 361 aaPredicted RBP24.75■■□□□ 1.55
TSPAN4-217ENST00000527644 CHSY3Q70JA7 882 aa24.75■■□□□ 1.55
TSPAN4-217ENST00000527644 GOLGA7Q7Z5G4 137 aa24.75■■□□□ 1.55
TSPAN4-217ENST00000527644 CISD2Q8N5K1 135 aaKnown RBP24.75■■□□□ 1.55
TSPAN4-217ENST00000527644 CMTM7Q96FZ5 175 aa24.75■■□□□ 1.55
TSPAN4-217ENST00000527644 TBCDQ9BTW9 1192 aa24.75■■□□□ 1.55
TSPAN4-217ENST00000527644 IPPKQ9H8X2 491 aa24.75■■□□□ 1.55
TSPAN4-217ENST00000527644 ACTR8Q9H981 624 aa24.75■■□□□ 1.55
TSPAN4-217ENST00000527644 MMP25Q9NPA2 562 aa24.75■■□□□ 1.55
TSPAN4-217ENST00000527644 MAP10Q9P2G4 905 aa24.75■■□□□ 1.55
TSPAN4-217ENST00000527644 TSC22D4Q9Y3Q8 395 aa24.75■■□□□ 1.55
TSPAN4-217ENST00000527644 PCDHGA11Q9Y5H2 935 aa24.75■■□□□ 1.55
TSPAN4-217ENST00000527644 IGKV3D-11A0A0A0MRZ8 115 aa24.74■■□□□ 1.55
TSPAN4-217ENST00000527644 TCRBV16S1A1N1A0A5B0 115 aa24.74■■□□□ 1.55
TSPAN4-217ENST00000527644 STX16-NPEPL1H3BU86 382 aa24.74■■□□□ 1.55
TSPAN4-217ENST00000527644 STX16O14662 325 aa24.74■■□□□ 1.55
TSPAN4-217ENST00000527644 SMIM24O75264 130 aa24.74■■□□□ 1.55
TSPAN4-217ENST00000527644 MAOAP21397 527 aa24.74■■□□□ 1.55
TSPAN4-217ENST00000527644 TSFMP43897 325 aaKnown RBP24.74■■□□□ 1.55
TSPAN4-217ENST00000527644 RCN2Q14257 317 aa24.74■■□□□ 1.55
TSPAN4-217ENST00000527644 TEX35Q5T0J7 233 aa24.74■■□□□ 1.55
TSPAN4-217ENST00000527644 ABHD17BQ5VST6 288 aa24.74■■□□□ 1.55
TSPAN4-217ENST00000527644 H3F3CQ6NXT2 135 aa24.74■■□□□ 1.55
TSPAN4-217ENST00000527644 MYLK4Q86YV6 388 aaPredicted RBP24.74■■□□□ 1.55
TSPAN4-217ENST00000527644 PHF21BQ96EK2 531 aa24.74■■□□□ 1.55
TSPAN4-217ENST00000527644 RNF32Q9H0A6 362 aa24.74■■□□□ 1.55
TSPAN4-217ENST00000527644 MRPL46Q9H2W6 279 aaKnown RBP24.74■■□□□ 1.55
TSPAN4-217ENST00000527644 KCNK13Q9HB14 408 aa24.74■■□□□ 1.55
TSPAN4-217ENST00000527644 PLA2G3Q9NZ20 509 aa24.74■■□□□ 1.55
TSPAN4-217ENST00000527644 DAPP1Q9UN19 280 aa24.74■■□□□ 1.55
TSPAN4-217ENST00000527644 MRPS33Q9Y291 106 aaKnown RBP24.74■■□□□ 1.55
TSPAN4-217ENST00000527644 SHANK1Q9Y566 2161 aa24.73■■□□□ 1.55
TSPAN4-217ENST00000527644 IQANK1A0A1B0GTG1 560 aa24.73■■□□□ 1.55
TSPAN4-217ENST00000527644 A8MUI8 341 aa24.73■■□□□ 1.55
TSPAN4-217ENST00000527644 CLDN4O14493 209 aa24.73■■□□□ 1.55
TSPAN4-217ENST00000527644 TGFB1P01137 390 aa24.73■■□□□ 1.55
TSPAN4-217ENST00000527644 CERS1P27544 350 aa24.73■■□□□ 1.55
TSPAN4-217ENST00000527644 EEF1DP29692 281 aaKnown RBP24.73■■□□□ 1.55
TSPAN4-217ENST00000527644 PIK3CBP42338 1070 aa24.73■■□□□ 1.55
TSPAN4-217ENST00000527644 LIM2P55344 173 aa24.73■■□□□ 1.55
TSPAN4-217ENST00000527644 SLC26A5P58743 744 aa24.73■■□□□ 1.55
TSPAN4-217ENST00000527644 UBE3DQ7Z6J8 389 aa24.73■■□□□ 1.55
TSPAN4-217ENST00000527644 GSPT2Q8IYD1 628 aaKnown RBP24.73■■□□□ 1.55
TSPAN4-217ENST00000527644 CATSPER1Q8NEC5 780 aa24.73■■□□□ 1.55
TSPAN4-217ENST00000527644 REPS1Q96D71 796 aa24.73■■□□□ 1.55
TSPAN4-217ENST00000527644 C19orf60Q96EN9 201 aa24.73■■□□□ 1.55
TSPAN4-217ENST00000527644 CCDC77Q9BR77 488 aa24.73■■□□□ 1.55
TSPAN4-217ENST00000527644 SLC29A3Q9BZD2 475 aa24.73■■□□□ 1.55
TSPAN4-217ENST00000527644 EPB41L4BQ9H329 900 aa24.73■■□□□ 1.55
TSPAN4-217ENST00000527644 NECTIN3Q9NQS3 549 aa24.73■■□□□ 1.55
TSPAN4-217ENST00000527644 STMN3Q9NZ72 180 aa24.73■■□□□ 1.55
TSPAN4-217ENST00000527644 COPG1Q9Y678 874 aaKnown RBP24.73■■□□□ 1.55
TSPAN4-217ENST00000527644 H0YIV9 168 aa24.72■■□□□ 1.55
TSPAN4-217ENST00000527644 HSD17B7P56937 341 aa24.72■■□□□ 1.55
TSPAN4-217ENST00000527644 DEPDC1Q5TB30 811 aa24.72■■□□□ 1.55
TSPAN4-217ENST00000527644 KHDRBS2Q5VWX1 349 aaKnown RBP24.72■■□□□ 1.55
TSPAN4-217ENST00000527644 SCUBE1Q8IWY4 988 aa24.72■■□□□ 1.55
TSPAN4-217ENST00000527644 ZNF595Q8IYB9 648 aa24.72■■□□□ 1.55
TSPAN4-217ENST00000527644 CYP4X1Q8N118 509 aa24.72■■□□□ 1.55
TSPAN4-217ENST00000527644 L3MBTL4Q8NA19 623 aa24.72■■□□□ 1.55
TSPAN4-217ENST00000527644 HUS1BQ8NHY5 278 aa24.72■■□□□ 1.55
TSPAN4-217ENST00000527644 ZNF354BQ96LW1 612 aa24.72■■□□□ 1.55
TSPAN4-217ENST00000527644 MAGEB10Q96LZ2 347 aaPredicted RBP24.72■■□□□ 1.55
TSPAN4-217ENST00000527644 LYRM4Q9HD34 91 aa24.72■■□□□ 1.55
TSPAN4-217ENST00000527644 PRTFDC1Q9NRG1 225 aa24.72■■□□□ 1.55
TSPAN4-217ENST00000527644 ASF1BQ9NVP2 202 aa24.72■■□□□ 1.55
TSPAN4-217ENST00000527644 RELNP78509 3460 aa24.71■■□□□ 1.55
TSPAN4-217ENST00000527644 WDPCPO95876 746 aa24.71■■□□□ 1.55
TSPAN4-217ENST00000527644 MYBL2P10244 700 aa24.71■■□□□ 1.55
TSPAN4-217ENST00000527644 ATP5A1P25705 553 aaKnown RBP24.71■■□□□ 1.55
TSPAN4-217ENST00000527644 TNFRSF8P28908 595 aa24.71■■□□□ 1.55
TSPAN4-217ENST00000527644 TNFSF10P50591 281 aa24.71■■□□□ 1.55
TSPAN4-217ENST00000527644 ZNF33BQ06732 778 aa24.71■■□□□ 1.55
TSPAN4-217ENST00000527644 DDX39BQ13838 428 aaKnown RBP24.71■■□□□ 1.55
TSPAN4-217ENST00000527644 AP5B1Q2VPB7 878 aa24.71■■□□□ 1.55
TSPAN4-217ENST00000527644 LCA5Q86VQ0 697 aa24.71■■□□□ 1.55
TSPAN4-217ENST00000527644 OR1N1Q8NGS0 311 aa24.71■■□□□ 1.55
TSPAN4-217ENST00000527644 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.71■■□□□ 1.557e-6■■□□□ 11.7
TSPAN4-217ENST00000527644 ATP6V1E2Q96A05 226 aa24.71■■□□□ 1.55
TSPAN4-217ENST00000527644 NOL11Q9H8H0 719 aaKnown RBP24.71■■□□□ 1.55
TSPAN4-217ENST00000527644 PSMC3IPQ9P2W1 217 aaPredicted RBP24.71■■□□□ 1.55
TSPAN4-217ENST00000527644 TRAV17A0A0B4J275 112 aa24.7■■□□□ 1.54
TSPAN4-217ENST00000527644 SAGE2PA6NJ88 616 aa24.7■■□□□ 1.54
TSPAN4-217ENST00000527644 CYR61O00622 381 aa24.7■■□□□ 1.54
TSPAN4-217ENST00000527644 SCELO95171 688 aa24.7■■□□□ 1.54
TSPAN4-217ENST00000527644 CLDN9O95484 217 aa24.7■■□□□ 1.54
TSPAN4-217ENST00000527644 PHEXP78562 749 aa24.7■■□□□ 1.54
TSPAN4-217ENST00000527644 CPSF6Q16630 551 aaKnown RBP eCLIP24.7■■□□□ 1.54
TSPAN4-217ENST00000527644 RPUSD3Q6P087 351 aaKnown RBP24.7■■□□□ 1.54
TSPAN4-217ENST00000527644 ZNF793Q6ZN11 406 aa24.7■■□□□ 1.54
TSPAN4-217ENST00000527644 TMEM151AQ8N4L1 468 aa24.7■■□□□ 1.54
TSPAN4-217ENST00000527644 ACOT4Q8N9L9 421 aa24.7■■□□□ 1.54
TSPAN4-217ENST00000527644 FAM47BQ8NA70 645 aa24.7■■□□□ 1.54
TSPAN4-217ENST00000527644 ELP5Q8TE02 316 aa24.7■■□□□ 1.54
TSPAN4-217ENST00000527644 BARD1Q99728 777 aaKnown RBP24.7■■□□□ 1.54
TSPAN4-217ENST00000527644 CENPKQ9BS16 269 aa24.7■■□□□ 1.54
TSPAN4-217ENST00000527644 OR51B5Q9H339 312 aa24.7■■□□□ 1.54
TSPAN4-217ENST00000527644 DMRT3Q9NQL9 472 aa24.7■■□□□ 1.54
TSPAN4-217ENST00000527644 KCMF1Q9P0J7 381 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms