RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 A6NCN8 305 aa1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 FAM231BA6NCW3 169 aa1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 FRAT2O75474 233 aaPredicted RBP1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 PENKP01210 267 aaPredicted RBP1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 DLATP10515 647 aaKnown RBP1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 GRB14Q14449 540 aa1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 C17orf58Q2M2W7 97 aa1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 ZNF542PQ5EBM4 170 aa1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 CCDC71Q8IV32 467 aaPredicted RBP1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 H1FOOQ8IZA3 346 aaPredicted RBP1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 TAGAPQ8N103 731 aa1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 KIR2DL5AQ8N109 375 aa1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 SEPT1Q8WYJ6 367 aa1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 SECISBP2LQ93073 1101 aaKnown RBP1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 SGF29Q96ES7 293 aa1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 IMMP1LQ96LU5 166 aa1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 MUS81Q96NY9 551 aa1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 CCDC106Q9BWC9 280 aa1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 MRPL1Q9BYD6 325 aaKnown RBP1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 XAB2Q9HCS7 855 aaKnown RBP1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 PHPT1Q9NRX4 125 aaPredicted RBP1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 RCOR3Q9P2K3 495 aaPredicted RBP1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 CRCT1Q9UGL9 99 aa1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 NCKAP1Q9Y2A7 1128 aa1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 GAKO14976 1311 aa1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 E5RGE8 158 aa1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 MLNRO43193 412 aa1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 CREB3O43889 395 aa1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 MAGEA9P43362 315 aa1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 GNB2P62879 340 aa1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 CNPY1Q3B7I2 92 aa1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 SUSD4Q5VX71 490 aa1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 TCEAL6Q6IPX3 200 aa1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 COX8CQ7Z4L0 72 aa1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 CAMKMTQ7Z624 323 aa1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 AMIGO1Q86WK6 493 aa1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 SETD7Q8WTS6 366 aaKnown RBP1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 LIPHQ8WWY8 451 aa1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 EXOC4Q96A65 974 aa1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 JAKMIP2Q96AA8 810 aa1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 RSRC1Q96IZ7 334 aaKnown RBP1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 GDAP1L1Q96MZ0 367 aa1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 TECTBQ96PL2 329 aa1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 GPR88Q9GZN0 384 aa1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 RPF1Q9H9Y2 349 aaKnown RBP1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 PATZ1Q9HBE1 687 aaKnown RBP1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 KLRF1Q9NZS2 232 aa1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 AGTPBP1Q9UPW5 1226 aa1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 NSG2Q9Y328 171 aa1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 ARHGAP23Q9P227 1491 aa1.55□□□□□ -2.16
ECHDC1-219ENST00000526299 IGLV3-16A0A075B6K0 115 aa1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 EDDM13A0A1B0GTR0 161 aa1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 PRSS46E5RG02 174 aa1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 ANHXE9PGG2 379 aa1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 GPAA1O43292 621 aa1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 EPB41L2O43491 1005 aaKnown RBP1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 CA11O75493 328 aa1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 CSH1P0DML2 217 aa1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 CSH2P0DML3 217 aa1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 EEF1B2P24534 225 aaKnown RBP1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 SULT2A1Q06520 285 aa1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 PSG7Q13046 419 aa1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 CHAF1BQ13112 559 aa1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 AGBL2Q5U5Z8 902 aa1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 C15orf52Q6ZUT6 534 aaKnown RBP1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 SAMD12Q8N8I0 201 aa1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 SYT2Q8N9I0 419 aaPredicted RBP1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 NTNG2Q96CW9 530 aa1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 HDAC11Q96DB2 347 aa1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 C16orf74Q96GX8 76 aa1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 TIGD1Q96MW7 591 aa1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 NAP1L4Q99733 375 aaKnown RBP1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 CHMP4AQ9BY43 222 aa1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 NMUR1Q9HB89 426 aa1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 HAUS2Q9NVX0 235 aa1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 RNF24Q9Y225 148 aa1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 ZNF175Q9Y473 711 aa1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 RSF1Q96T23 1441 aaPredicted RBP1.54□□□□□ -2.16
ECHDC1-219ENST00000526299 NEDD8-MDP1E9PL57 170 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 ZBED4O75132 1171 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 TSPAN9O75954 239 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 OR9G9P0C7N8 305 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 LIMK1P53667 647 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 BACE1P56817 501 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 GSTO1P78417 241 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 ZNF33BQ06732 778 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 OVGP1Q12889 678 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 BECN1Q14457 450 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 TGIF1Q15583 401 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 PPP1R3AQ16821 1122 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 LETM2Q2VYF4 491 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 OTPQ5XKR4 325 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 NEPROQ6NW34 567 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 CENPVQ7Z7K6 275 aaPredicted RBP1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 TLK2Q86UE8 772 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 DNAAF5Q86Y56 855 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 APOBEC3FQ8IUX4 373 aaKnown RBP1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 CROCCP3Q8IVE0 287 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms