RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 EPCAMP16422 314 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 SRD5A1P18405 259 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 UBA1P22314 1058 aaKnown RBP4.22□□□□□ -1.73
CD44-213ENST00000525209 FBLN1P23142 703 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 IL32P24001 234 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 NDUFS1P28331 727 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 CYP2C18P33260 490 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 NAA10P41227 235 aaPredicted RBP4.22□□□□□ -1.73
CD44-213ENST00000525209 MAGEA11P43364 429 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 SLC6A8P48029 635 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 KCNJ4P48050 445 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 CLCN5P51795 746 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 CHN2P52757 468 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 MAPK12P53778 367 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 PLOD1Q02809 727 aaPredicted RBP4.22□□□□□ -1.73
CD44-213ENST00000525209 LRRC63Q05C16 580 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 ITGB3BPQ13352 177 aaPredicted RBP4.22□□□□□ -1.73
CD44-213ENST00000525209 MSLNQ13421 630 aaPredicted RBP4.22□□□□□ -1.73
CD44-213ENST00000525209 PTGISQ16647 500 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 C2orf68Q2NKX9 166 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 DCAF4L1Q3SXM0 396 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 MOGAT2Q3SYC2 334 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 PLK5Q496M5 336 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 AGKQ53H12 422 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 CMPK2Q5EBM0 449 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 SAPCD1Q5SSQ6 148 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 HHATQ5VTY9 493 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 AGBL4Q5VU57 503 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 TMEM225Q6GV28 225 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 ZNF517Q6ZMY9 492 aaPredicted RBP4.22□□□□□ -1.73
CD44-213ENST00000525209 TPRG1Q6ZUI0 275 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 SPRED1Q7Z699 444 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 CCDC190Q86UF4 302 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 TMPRSS6Q8IU80 811 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 CBWD2Q8IUF1 395 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 FAM86B1Q8N7N1 296 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 GJC3Q8NFK1 279 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 VANGL1Q8TAA9 524 aaPredicted RBP4.22□□□□□ -1.73
CD44-213ENST00000525209 PHOSPHO2Q8TCD6 241 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 HM13Q8TCT9 377 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 RAET1EQ8TD07 263 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 PIGCQ92535 297 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 SUSD6Q92537 303 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 SNAPC3Q92966 411 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 P2RX5Q93086 422 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 RFT1Q96AA3 541 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 MRGPRFQ96AM1 343 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 PINX1Q96BK5 328 aaKnown RBP4.22□□□□□ -1.73
CD44-213ENST00000525209 LOXL4Q96JB6 756 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 LMLNQ96KR4 655 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 GPR137Q96N19 417 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 VPS35Q96QK1 796 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 TESK2Q96S53 571 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 CCT8L2Q96SF2 557 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 C16orf70Q9BSU1 422 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 KRTAP9-9Q9BYP9 154 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 KRTAP9-4Q9BYQ2 154 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 FRMD8Q9BZ67 464 aaPredicted RBP4.22□□□□□ -1.73
CD44-213ENST00000525209 API5Q9BZZ5 524 aaKnown RBP4.22□□□□□ -1.73
CD44-213ENST00000525209 AMBRA1Q9C0C7 1298 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 SLC39A8Q9C0K1 460 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 NDEL1Q9GZM8 345 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 MRM3Q9HC36 420 aaKnown RBP4.22□□□□□ -1.73
CD44-213ENST00000525209 MIS18AQ9NYP9 233 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 MTCH1Q9NZJ7 389 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 OR14J1Q9UGF5 321 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 NARFQ9UHQ1 456 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 CYTH4Q9UIA0 394 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 ENPP5Q9UJA9 477 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 CROTQ9UKG9 612 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 GRIP1Q9Y3R0 1128 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 ATG4BQ9Y4P1 393 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 NME7Q9Y5B8 376 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 NUP153P49790 1475 aaKnown RBP4.22□□□□□ -1.73
CD44-213ENST00000525209 ITSN2Q9NZM3 1697 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 A0A0A0MQY5 61 aa4.21□□□□□ -1.74
CD44-213ENST00000525209 PRAMEF33A0A0G2JMD5 474 aa4.21□□□□□ -1.74
CD44-213ENST00000525209 GOLGA8QA0A0J9YX86 632 aa4.21□□□□□ -1.74
CD44-213ENST00000525209 A0A1W2PPK0 400 aa4.21□□□□□ -1.74
CD44-213ENST00000525209 TYW5A2RUC4 315 aaKnown RBP4.21□□□□□ -1.74
CD44-213ENST00000525209 TMEM210A6NLX4 147 aa4.21□□□□□ -1.74
CD44-213ENST00000525209 PRSS46E5RG02 174 aa4.21□□□□□ -1.74
CD44-213ENST00000525209 NPIPA2E9PIF3 369 aa4.21□□□□□ -1.74
CD44-213ENST00000525209 PDLIM1O00151 329 aa4.21□□□□□ -1.74
CD44-213ENST00000525209 WWP2O00308 870 aa4.21□□□□□ -1.74
CD44-213ENST00000525209 PLPP2O43688 288 aa4.21□□□□□ -1.74
CD44-213ENST00000525209 KDELR3O43731 214 aa4.21□□□□□ -1.74
CD44-213ENST00000525209 OR10H2O60403 315 aa4.21□□□□□ -1.74
CD44-213ENST00000525209 PRAMEF10O60809 474 aa4.21□□□□□ -1.74
CD44-213ENST00000525209 GLRA3O75311 464 aa4.21□□□□□ -1.74
CD44-213ENST00000525209 NEBLO76041 1014 aa4.21□□□□□ -1.74
CD44-213ENST00000525209 SYNGR4O95473 234 aa4.21□□□□□ -1.74
CD44-213ENST00000525209 FTH1P02794 183 aa4.21□□□□□ -1.74
CD44-213ENST00000525209 RETP07949 1114 aa4.21□□□□□ -1.74
CD44-213ENST00000525209 ADH4P08319 380 aa4.21□□□□□ -1.74
CD44-213ENST00000525209 ITGAMP11215 1152 aa4.21□□□□□ -1.74
CD44-213ENST00000525209 CCNB1P14635 433 aa4.21□□□□□ -1.74
CD44-213ENST00000525209 CPN1P15169 458 aa4.21□□□□□ -1.74
CD44-213ENST00000525209 B4GALT1P15291 398 aa4.21□□□□□ -1.74
CD44-213ENST00000525209 NAGAP17050 411 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms