RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 HNRNPDQ14103 355 aaKnown RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 TFDP2Q14188 446 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 SF3B4Q15427 424 aaKnown RBP eCLIP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 TRADDQ15628 312 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 TRIP13Q15645 432 aaPredicted RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 CCNG2Q16589 344 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 MRGPRG-AS1Q2M3A8 158 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 FBXO43Q4G163 708 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 TEX44Q53QW1 395 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 SLC45A4Q5BKX6 768 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 ANKRD20A2Q5SQ80 823 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 SYCP2LQ5T4T6 812 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 ANKRD20A1Q5TYW2 823 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 ANKRD20A3Q5VUR7 823 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 NCEH1Q6PIU2 408 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 CCDC137Q6PK04 289 aaKnown RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 KLHL17Q6TDP4 642 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 KDELC1Q6UW63 502 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 KDM7AQ6ZMT4 941 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 ZNF534Q76KX8 674 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 SYT13Q7L8C5 426 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 EXOC3L1Q86VI1 746 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 MMAAQ8IVH4 418 aaKnown RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 NAGSQ8N159 534 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 ATPAF2Q8N5M1 289 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 AADATQ8N5Z0 425 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 ZNF527Q8NB42 609 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 CCNYQ8ND76 341 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 PRSS33Q8NF86 280 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 OR2AP1Q8NGE2 309 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 CCDC110Q8TBZ0 833 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 TFB1MQ8WVM0 346 aaKnown RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 HTR3CQ8WXA8 447 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 RLN3Q8WXF3 142 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 P3H4Q92791 437 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 ISG20Q96AZ6 181 aaKnown RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 ECHDC3Q96DC8 303 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 OXNAD1Q96HP4 312 aaPredicted RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 ZNF599Q96NL3 588 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 AGAP3Q96P47 875 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 IL17FQ96PD4 163 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 PSKH2Q96QS6 385 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 TRIB3Q96RU7 358 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 NODALQ96S42 347 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 TRIM51Q9BSJ1 452 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 MLPHQ9BV36 600 aaPredicted RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 TDRD1Q9BXT4 1180 aaKnown RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 MAK16Q9BXY0 300 aaKnown RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 NPFFR1Q9GZQ6 430 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 LHPPQ9H008 270 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 CLPBQ9H078 707 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 DDX47Q9H0S4 455 aaKnown RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 RSPH9Q9H1X1 276 aaPredicted RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 PABPC3Q9H361 631 aaKnown RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 MFSD1Q9H3U5 465 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 ZDHHC6Q9H6R6 413 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 EBF2Q9HAK2 575 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 NOD2Q9HC29 1040 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 NT5MQ9NPB1 228 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 OBP2BQ9NPH6 170 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 RRAGDQ9NQL2 400 aaPredicted RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 PRMT8Q9NR22 394 aaPredicted RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 RBM22Q9NW64 420 aaKnown RBP eCLIP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 DONSONQ9NYP3 566 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 GRHL1Q9NZI5 618 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 SEPT10Q9P0V9 454 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 KLQ9UEF7 1012 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 CDC23Q9UJX2 597 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 ITM2BQ9Y287 266 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 SAR1BQ9Y6B6 198 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 OTOGLQ3ZCN5 2332 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 PCM1Q15154 2024 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 AKAP13Q12802 2813 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 DMXL2Q8TDJ6 3036 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 RP1P56715 2156 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 ASXL3Q9C0F0 2248 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 IGHV1OR15-9A0A0B4J2B8 117 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 EDDM13A0A1B0GTR0 161 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 CXorf51AA0A1B0GTR3 108 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 TSPAN11A1L157 253 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 DYTNA2CJ06 578 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 TARSL2A2RTX5 802 aaKnown RBP2.87□□□□□ -1.95
CSDE1-208ENST00000524652 MAGEA13PA6NCF6 341 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 C5orf60A6NFR6 353 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 HACD1B0YJ81 288 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 NCAM2O15394 837 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 TTI1O43156 1089 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 RAD51CO43502 376 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 BANF1O75531 89 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 SKAP2O75563 359 aaPredicted RBP2.87□□□□□ -1.95
CSDE1-208ENST00000524652 TMEM63AO94886 807 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 IGSF6O95976 241 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 GSRP00390 522 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 UGT2B4P06133 528 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 ATP5BP06576 529 aaKnown RBP2.87□□□□□ -1.95
CSDE1-208ENST00000524652 ALPIP09923 528 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 LYL1P12980 280 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 CHN1P15882 459 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms