RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033		M0R082	166 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033		M0R3G1	203 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	GNGT2	O14610	69 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	KDM1A	O60341	852 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	E2F6	O75461	281 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	CCNDBP1	O95273	360 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	HMBS	P08397	361 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	VSIG8	P0DPA2	414 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	PRPS2	P11908	318 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	PABPC1	P11940	636 aa	Known RBP	7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	BCKDHB	P21953	392 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	NTSR1	P30989	418 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	DNAJA1	P31689	397 aa	Known RBP	7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	ADH7	P40394	386 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	CDKN2C	P42773	168 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	TRPC1	P48995	793 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	RGS4	P49798	205 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	VBP1	P61758	197 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	CSNK2B	P67870	215 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	GPLD1	P80108	840 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	ARF5	P84085	180 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	PLIN5	Q00G26	463 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	HMGCS1	Q01581	520 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	PPP1R8	Q12972	351 aa	Known RBP	7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	SLC14A1	Q13336	389 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	IRF3	Q14653	427 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	ZNF181	Q2M3W8	571 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	PAGE2B	Q5JRK9	111 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	TOR1AIP1	Q5JTV8	583 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	RNFT1	Q5M7Z0	435 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	CXorf57	Q6NSI4	855 aa	Known RBP	7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	ERICH5	Q6P6B1	374 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	MACC1	Q6ZN28	852 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	GCNT7	Q6ZNI0	430 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	CBLL1	Q75N03	491 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	EIF3M	Q7L2H7	374 aa	Known RBP	7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	SLC46A3	Q7Z3Q1	461 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	SERPINA11	Q86U17	422 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	SLC22A16	Q86VW1	577 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	PTOV1	Q86YD1	416 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	SNX29P2	Q8IUI4	249 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	RASGRP3	Q8IV61	690 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	TMEM132C	Q8N3T6	1108 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	BEND7	Q8N7W2	519 aa	Predicted RBP	7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	FRMD1	Q8N878	549 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	TTC29	Q8NA56	475 aa	Predicted RBP	7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	PIGK	Q92643	395 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	RPL3L	Q92901	407 aa	Known RBP	7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	NCLN	Q969V3	563 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	ITCH	Q96J02	903 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	OR52E6	Q96RD3	313 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	CDK5RAP1	Q96SZ6	601 aa	Known RBP	7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	APOL4	Q9BPW4	351 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	TBCD	Q9BTW9	1192 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	THUMPD3	Q9BV44	507 aa	Known RBP	7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	EDEM2	Q9BV94	578 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	HOXD1	Q9GZZ0	328 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	CHST8	Q9H2A9	424 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	MMP27	Q9H306	513 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	PARVB	Q9HBI1	364 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	SCN3B	Q9NY72	215 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	GPRC5B	Q9NZH0	403 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	KLHL42	Q9P2K6	505 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	KL	Q9UEF7	1012 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	KLHL3	Q9UH77	587 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	MBD1	Q9UIS9	605 aa	Predicted RBP	7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	GDF2	Q9UK05	429 aa	Predicted RBP	7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	GMPPB	Q9Y5P6	360 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	PRSS21	Q9Y6M0	314 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	EPG5	Q9HCE0	2579 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	NBEA	Q8NFP9	2946 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033		A0A1W2PQF6	199 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	LNP1	A1A4G5	178 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	AGAP5	A6NIR3	686 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	EFCAB9	A8MZ26	197 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	PATE3	B3GLJ2	98 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	PRRT4	C9JH25	899 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	PTGES3L	E9PB15	166 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	GFRA2	O00451	464 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	FFAR3	O14843	346 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	RGS13	O14921	159 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	DSCR3	O14972	297 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	GPR42	O15529	346 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	GPR39	O43194	453 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	NUAK1	O60285	661 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	SCN2B	O60939	215 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	FAM20B	O75063	409 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	CLDN11	O75508	207 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	STC2	O76061	302 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	KCNK2	O95069	426 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	KCNK5	O95279	499 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	FADS2	O95864	444 aa	Known RBP	7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	PTTG1	O95997	202 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	KLKB1	P03952	638 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	LCK	P06239	509 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	RHOC	P08134	193 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	CISD3	P0C7P0	127 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	HOXB2	P14652	356 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	GPX2	P18283	190 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	GABRB1	P18505	474 aa		7.5	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms