RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 MARVELD2Q8N4S9 558 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 FAM57AQ8TBR7 257 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 CHTF18Q8WVB6 975 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 ESAMQ96AP7 390 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 CSF3RQ99062 836 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 VKORC1Q9BQB6 163 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 NAT9Q9BTE0 207 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 DEPPQ9NTK1 212 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 CTNNAL1Q9UBT7 734 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 SNX12Q9UMY4 172 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 ERVK-11Q9UQG0 969 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 TEX264Q9Y6I9 313 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 KCNE2Q9Y6J6 123 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 ARHGAP21Q5T5U3 1957 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 C2CD3Q4AC94 2353 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 AKAP9Q99996 3911 aa14.37□□□□□ -0.11
MRPS28-209ENST00000522987 A0A0G2JMM0 328 aa14.37□□□□□ -0.11
MRPS28-209ENST00000522987 A0A1W2PPB8 328 aa14.37□□□□□ -0.11
MRPS28-209ENST00000522987 A0A1W2PRS3 328 aa14.37□□□□□ -0.11
MRPS28-209ENST00000522987 KIR3DP1A8MWS1 328 aa14.37□□□□□ -0.11
MRPS28-209ENST00000522987 KLRC4-KLRK1H3BQV0 150 aa14.37□□□□□ -0.11
MRPS28-209ENST00000522987 SH3BGRLO75368 114 aa14.37□□□□□ -0.11
MRPS28-209ENST00000522987 C1GALT1C1LP0DN25 315 aa14.37□□□□□ -0.11
MRPS28-209ENST00000522987 TFEBP19484 476 aa14.37□□□□□ -0.11
MRPS28-209ENST00000522987 CERS1P27544 350 aa14.37□□□□□ -0.11
MRPS28-209ENST00000522987 SSTR2P30874 369 aa14.37□□□□□ -0.11
MRPS28-209ENST00000522987 TRHRP34981 398 aaPredicted RBP14.37□□□□□ -0.11
MRPS28-209ENST00000522987 STEAP4Q687X5 459 aa14.37□□□□□ -0.11
MRPS28-209ENST00000522987 NIPAL1Q6NVV3 410 aa14.37□□□□□ -0.11
MRPS28-209ENST00000522987 IL20RBQ6UXL0 311 aa14.37□□□□□ -0.11
MRPS28-209ENST00000522987 GALNT7Q86SF2 657 aa14.37□□□□□ -0.11
MRPS28-209ENST00000522987 ZC3HC1Q86WB0 502 aaKnown RBP14.37□□□□□ -0.11
MRPS28-209ENST00000522987 CCDC71Q8IV32 467 aaPredicted RBP14.37□□□□□ -0.11
MRPS28-209ENST00000522987 KLHDC8AQ8IYD2 350 aa14.37□□□□□ -0.11
MRPS28-209ENST00000522987 UCK2Q9BZX2 261 aa14.37□□□□□ -0.11
MRPS28-209ENST00000522987 CAB39LQ9H9S4 337 aa14.37□□□□□ -0.11
MRPS28-209ENST00000522987 COQ3Q9NZJ6 369 aa14.37□□□□□ -0.11
MRPS28-209ENST00000522987 CORO1CQ9ULV4 474 aaPredicted RBP14.37□□□□□ -0.11
MRPS28-209ENST00000522987 OARD1Q9Y530 152 aa14.37□□□□□ -0.11
MRPS28-209ENST00000522987 WWP2O00308 870 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 CLGNO14967 610 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 H2AFYO75367 372 aaKnown RBP14.36□□□□□ -0.11
MRPS28-209ENST00000522987 OR2J2O76002 312 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 IFNA16P05015 189 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 GMPRP36959 345 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 SSR4P51571 173 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 RAB38P57729 211 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 STXBP1P61764 594 aaKnown RBP14.36□□□□□ -0.11
MRPS28-209ENST00000522987 MRPS25P82663 173 aaKnown RBP14.36□□□□□ -0.11
MRPS28-209ENST00000522987 PLGLB1Q02325 96 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 ID2Q02363 134 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 MGAT5Q09328 741 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 PDIA2Q13087 525 aaKnown RBP14.36□□□□□ -0.11
MRPS28-209ENST00000522987 BMPR2Q13873 1038 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 XKR6Q5GH73 641 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 TMIGD1Q6UXZ0 262 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 SLCO4C1Q6ZQN7 724 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 CDH24Q86UP0 819 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 SCUBE1Q8IWY4 988 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 NKAPQ8N5F7 415 aaKnown RBP14.36□□□□□ -0.11
MRPS28-209ENST00000522987 ZNF321PQ8N8H1 164 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 SNX31Q8N9S9 440 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 FBXO36Q8NEA4 188 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 PHF10Q8WUB8 498 aaKnown RBP14.36□□□□□ -0.11
MRPS28-209ENST00000522987 EXT2Q93063 718 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 GAL3ST3Q96A11 431 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 MS4A6EQ96DS6 147 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 VMP1Q96GC9 406 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 PDLIM5Q96HC4 596 aaKnown RBP14.36□□□□□ -0.11
MRPS28-209ENST00000522987 CCDC77Q9BR77 488 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 TRIM45Q9H8W5 580 aaPredicted RBP14.36□□□□□ -0.11
MRPS28-209ENST00000522987 TNFRSF10DQ9UBN6 386 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 MMACHCQ9Y4U1 282 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 CLDN16Q9Y5I7 305 aa14.36□□□□□ -0.11
MRPS28-209ENST00000522987 HIVEP1P15822 2718 aa14.35□□□□□ -0.11
MRPS28-209ENST00000522987 A8MVJ9 347 aa14.35□□□□□ -0.11
MRPS28-209ENST00000522987 B3GALT2O43825 422 aa14.35□□□□□ -0.11
MRPS28-209ENST00000522987 PRAMEF4O60810 478 aa14.35□□□□□ -0.11
MRPS28-209ENST00000522987 OR6B1O95007 311 aa14.35□□□□□ -0.11
MRPS28-209ENST00000522987 GNAZP19086 355 aa14.35□□□□□ -0.11
MRPS28-209ENST00000522987 SOX3P41225 446 aa14.35□□□□□ -0.11
MRPS28-209ENST00000522987 ARL4CP56559 192 aa14.35□□□□□ -0.11
MRPS28-209ENST00000522987 DR1Q01658 176 aa14.35□□□□□ -0.11
MRPS28-209ENST00000522987 MORF4L2Q15014 288 aa14.35□□□□□ -0.11
MRPS28-209ENST00000522987 ZNF750Q32MQ0 723 aa14.35□□□□□ -0.11
MRPS28-209ENST00000522987 PRAMEF9Q5VWM5 478 aa14.35□□□□□ -0.11
MRPS28-209ENST00000522987 VN1R5Q7Z5H4 357 aa14.35□□□□□ -0.11
MRPS28-209ENST00000522987 OR5M9Q8NGP3 310 aa14.35□□□□□ -0.11
MRPS28-209ENST00000522987 DOK4Q8TEW6 326 aa14.35□□□□□ -0.11
MRPS28-209ENST00000522987 RHBDF1Q96CC6 855 aa14.35□□□□□ -0.11
MRPS28-209ENST00000522987 QRFPRQ96P65 431 aa14.35□□□□□ -0.11
MRPS28-209ENST00000522987 TMEM79Q9BSE2 394 aa14.35□□□□□ -0.11
MRPS28-209ENST00000522987 SMYD2Q9NRG4 433 aa14.35□□□□□ -0.11
MRPS28-209ENST00000522987 HPF1Q9NWY4 346 aa14.35□□□□□ -0.11
MRPS28-209ENST00000522987 WWOXQ9NZC7 414 aa14.35□□□□□ -0.11
MRPS28-209ENST00000522987 RNF6Q9Y252 685 aa14.35□□□□□ -0.11
MRPS28-209ENST00000522987 LIPGQ9Y5X9 500 aa14.35□□□□□ -0.11
MRPS28-209ENST00000522987 LRIT2A6NDA9 550 aa14.34□□□□□ -0.11
MRPS28-209ENST00000522987 ANKDD1BA6NHY2 528 aa14.34□□□□□ -0.11
MRPS28-209ENST00000522987 TMEM200CA6NKL6 621 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms