RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 CERS1P27544 350 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 MSH2P43246 934 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 RAB38P57729 211 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 LAPTM5Q13571 262 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 E2F2Q14209 437 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 TBCCQ15814 346 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 INAQ16352 499 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 RPS19BP1Q86WX3 136 aaKnown RBP17.49■□□□□ 0.39
SPIDR-220ENST00000522900 SLC5A8Q8N695 610 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 FAM47BQ8NA70 645 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 UBTD2Q8WUN7 234 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 IFT81Q8WYA0 676 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 GPR78Q96P69 363 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 CSF3RQ99062 836 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 UTP23Q9BRU9 249 aaKnown RBP17.49■□□□□ 0.39
SPIDR-220ENST00000522900 ACSS3Q9H6R3 686 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 KLHL1Q9NR64 748 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 MMACHCQ9Y4U1 282 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 CPAMD8Q8IZJ3 1885 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 SCN2AQ99250 2005 aa17.48■□□□□ 0.39
SPIDR-220ENST00000522900 A0A096LPK6 155 aa17.48■□□□□ 0.39
SPIDR-220ENST00000522900 MYOCOSA0A1B0GUC4 107 aa17.48■□□□□ 0.39
SPIDR-220ENST00000522900 K7EPI3 171 aa17.48■□□□□ 0.39
SPIDR-220ENST00000522900 ALDOAP04075 364 aaKnown RBP17.48■□□□□ 0.39
SPIDR-220ENST00000522900 TPP2P29144 1249 aaPredicted RBP17.48■□□□□ 0.39
SPIDR-220ENST00000522900 LIM2P55344 173 aa17.48■□□□□ 0.39
SPIDR-220ENST00000522900 TAS2R50P59544 299 aa17.48■□□□□ 0.39
SPIDR-220ENST00000522900 OR1C1Q15619 314 aa17.48■□□□□ 0.39
SPIDR-220ENST00000522900 HIST2H2ACQ16777 129 aaPredicted RBP17.48■□□□□ 0.39
SPIDR-220ENST00000522900 C4orf17Q53FE4 359 aa17.48■□□□□ 0.39
SPIDR-220ENST00000522900 PAGE2BQ5JRK9 111 aa17.48■□□□□ 0.39
SPIDR-220ENST00000522900 HIST2H2AA3Q6FI13 130 aa17.48■□□□□ 0.39
SPIDR-220ENST00000522900 TRIM40Q6P9F5 258 aa17.48■□□□□ 0.39
SPIDR-220ENST00000522900 ZNF793Q6ZN11 406 aa17.48■□□□□ 0.39
SPIDR-220ENST00000522900 CLNKQ7Z7G1 428 aa17.48■□□□□ 0.39
SPIDR-220ENST00000522900 RELL1Q8IUW5 271 aa17.48■□□□□ 0.39
SPIDR-220ENST00000522900 RNF175Q8N4F7 328 aa17.48■□□□□ 0.39
SPIDR-220ENST00000522900 TEX9Q8N6V9 391 aa17.48■□□□□ 0.39
SPIDR-220ENST00000522900 ARMC2Q8NEN0 867 aa17.48■□□□□ 0.39
SPIDR-220ENST00000522900 ZNF473Q8WTR7 871 aaKnown RBP17.48■□□□□ 0.39
SPIDR-220ENST00000522900 SERINC2Q96SA4 455 aa17.48■□□□□ 0.39
SPIDR-220ENST00000522900 PRTFDC1Q9NRG1 225 aa17.48■□□□□ 0.39
SPIDR-220ENST00000522900 PNO1Q9NRX1 252 aaKnown RBP17.48■□□□□ 0.39
SPIDR-220ENST00000522900 KCMF1Q9P0J7 381 aa17.48■□□□□ 0.39
SPIDR-220ENST00000522900 ABI3Q9P2A4 366 aa17.48■□□□□ 0.39
SPIDR-220ENST00000522900 OPTCQ9UBM4 332 aa17.48■□□□□ 0.39
SPIDR-220ENST00000522900 RTCAO00442 366 aaKnown RBP17.47■□□□□ 0.39
SPIDR-220ENST00000522900 NEURL1O76050 574 aa17.47■□□□□ 0.39
SPIDR-220ENST00000522900 MYO1DO94832 1006 aa17.47■□□□□ 0.39
SPIDR-220ENST00000522900 ACSL3O95573 720 aa17.47■□□□□ 0.39
SPIDR-220ENST00000522900 TGFB1P01137 390 aa17.47■□□□□ 0.39
SPIDR-220ENST00000522900 MYBL2P10244 700 aa17.47■□□□□ 0.39
SPIDR-220ENST00000522900 PCNAP12004 261 aa17.47■□□□□ 0.39
SPIDR-220ENST00000522900 COL8A1P27658 744 aa17.47■□□□□ 0.39
SPIDR-220ENST00000522900 TYK2P29597 1187 aa17.47■□□□□ 0.39
SPIDR-220ENST00000522900 ECHS1P30084 290 aa17.47■□□□□ 0.39
SPIDR-220ENST00000522900 PHBP35232 272 aa17.47■□□□□ 0.39
SPIDR-220ENST00000522900 MTTPP55157 894 aa17.47■□□□□ 0.39
SPIDR-220ENST00000522900 HSD17B7P56937 341 aa17.47■□□□□ 0.39
SPIDR-220ENST00000522900 OC90Q02509 493 aaPredicted RBP17.47■□□□□ 0.39
SPIDR-220ENST00000522900 PCDH1Q08174 1060 aa17.47■□□□□ 0.39
SPIDR-220ENST00000522900 PFKFB4Q16877 469 aa17.47■□□□□ 0.39
SPIDR-220ENST00000522900 FAM83EQ2M2I3 478 aa17.47■□□□□ 0.39
SPIDR-220ENST00000522900 MED27Q6P2C8 311 aa17.47■□□□□ 0.39
SPIDR-220ENST00000522900 LAS2Q8IYD9 372 aa17.47■□□□□ 0.39
SPIDR-220ENST00000522900 PLD6Q8N2A8 252 aaKnown RBP17.47■□□□□ 0.39
SPIDR-220ENST00000522900 APCDD1LQ8NCL9 501 aa17.47■□□□□ 0.39
SPIDR-220ENST00000522900 OR7G3Q8NG95 312 aa17.47■□□□□ 0.39
SPIDR-220ENST00000522900 DNAJB8Q8NHS0 232 aa17.47■□□□□ 0.39
SPIDR-220ENST00000522900 RHEBL1Q8TAI7 183 aa17.47■□□□□ 0.39
SPIDR-220ENST00000522900 MS4A8Q9BY19 250 aa17.47■□□□□ 0.39
SPIDR-220ENST00000522900 CDC42EP4Q9H3Q1 356 aaKnown RBP17.47■□□□□ 0.39
SPIDR-220ENST00000522900 MTRF1LQ9UGC7 380 aaKnown RBP17.47■□□□□ 0.39
SPIDR-220ENST00000522900 DAPP1Q9UN19 280 aa17.47■□□□□ 0.39
SPIDR-220ENST00000522900 A0A088AWK7 358 aa17.46■□□□□ 0.39
SPIDR-220ENST00000522900 SAP18O00422 153 aaKnown RBP17.46■□□□□ 0.39
SPIDR-220ENST00000522900 KLHL2O95198 593 aa17.46■□□□□ 0.39
SPIDR-220ENST00000522900 CRYABP02511 175 aaKnown RBP17.46■□□□□ 0.39
SPIDR-220ENST00000522900 STSP08842 583 aa17.46■□□□□ 0.39
SPIDR-220ENST00000522900 EPB42P16452 691 aa17.46■□□□□ 0.39
SPIDR-220ENST00000522900 ZNF10P21506 573 aaPredicted RBP17.46■□□□□ 0.39
SPIDR-220ENST00000522900 MLF1P58340 268 aa17.46■□□□□ 0.39
SPIDR-220ENST00000522900 SLC13A2Q13183 592 aa17.46■□□□□ 0.39
SPIDR-220ENST00000522900 SETDB1Q15047 1291 aa17.46■□□□□ 0.39
SPIDR-220ENST00000522900 ACAP2Q15057 778 aa17.46■□□□□ 0.39
SPIDR-220ENST00000522900 C1QL3Q5VWW1 255 aa17.46■□□□□ 0.39
SPIDR-220ENST00000522900 GFRALQ6UXV0 394 aa17.46■□□□□ 0.39
SPIDR-220ENST00000522900 ZNF227Q86WZ6 799 aa17.46■□□□□ 0.39
SPIDR-220ENST00000522900 LGI4Q8N135 537 aa17.46■□□□□ 0.39
SPIDR-220ENST00000522900 UHMK1Q8TAS1 419 aaKnown RBP17.46■□□□□ 0.39
SPIDR-220ENST00000522900 THAP3Q8WTV1 239 aaPredicted RBP17.46■□□□□ 0.39
SPIDR-220ENST00000522900 SLC44A1Q8WWI5 657 aa17.46■□□□□ 0.39
SPIDR-220ENST00000522900 SCMH1Q96GD3 660 aa17.46■□□□□ 0.39
SPIDR-220ENST00000522900 MAPKAP1Q9BPZ7 522 aa17.46■□□□□ 0.39
SPIDR-220ENST00000522900 FUT8Q9BYC5 575 aa17.46■□□□□ 0.39
SPIDR-220ENST00000522900 VPS11Q9H270 941 aa17.46■□□□□ 0.39
SPIDR-220ENST00000522900 ZNF358Q9NW07 568 aa17.46■□□□□ 0.39
SPIDR-220ENST00000522900 LRFN1Q9P244 771 aa17.46■□□□□ 0.39
SPIDR-220ENST00000522900 ZNF223Q9UK11 482 aaPredicted RBP17.46■□□□□ 0.39
SPIDR-220ENST00000522900 PCDHGB6Q9Y5F9 930 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms