RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 C2orf40Q9H1Z8 148 aa6.07□□□□□ -1.44
NUDCD1-204ENST00000521439 NMRK1Q9NWW6 199 aa6.07□□□□□ -1.44
NUDCD1-204ENST00000521439 ZDHHC2Q9UIJ5 367 aa6.07□□□□□ -1.44
NUDCD1-204ENST00000521439 DAPK2Q9UIK4 370 aa6.07□□□□□ -1.44
NUDCD1-204ENST00000521439 VANGL2Q9ULK5 521 aa6.07□□□□□ -1.44
NUDCD1-204ENST00000521439 CHMP2BQ9UQN3 213 aa6.07□□□□□ -1.44
NUDCD1-204ENST00000521439 ZFP37Q9Y6Q3 630 aaPredicted RBP6.07□□□□□ -1.44
NUDCD1-204ENST00000521439 SMCHD1A6NHR9 2005 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 FLT1P17948 1338 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 WDR19Q8NEZ3 1342 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 A0A087WV48 116 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 LOC105371267A0A1B0GV96 52 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 GOLGA8RI6L899 631 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 BMPR1BO00238 502 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 KMOO15229 486 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 MAGEB3O15480 346 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 NOL3O60936 208 aaKnown RBP6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 KLHL2O95198 593 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 PIGNO95427 931 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 CHRNA1P02708 482 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 RETP07949 1114 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 CALM1P0DP23 149 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 CALM2P0DP24 149 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 CALM3P0DP25 149 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 MNDAP41218 407 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 BMXP51813 675 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 MYL6P60660 151 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 UBE2HP62256 183 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 POLR2GP62487 172 aaKnown RBP eCLIP6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 S100A12P80511 92 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 ASPHQ12797 758 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 VEZF1Q14119 521 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 NCF4Q15080 339 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 MCMDC2Q4G0Z9 681 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 KLHL22Q53GT1 634 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 XKR3Q5GH77 459 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 TECRLQ5HYJ1 363 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 FAM76BQ5HYJ3 339 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 ABI3BPQ7Z7G0 1075 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 SMIM29Q86T20 159 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 AKAP14Q86UN6 197 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 OR8H3Q8N146 312 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 ZNF354BQ96LW1 612 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 TCEANC2Q96MN5 208 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 CITED2Q99967 270 aaPredicted RBP6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 SIKE1Q9BRV8 207 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 MIS12Q9H081 205 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 A4GALTQ9NPC4 353 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 ECHDC1Q9NTX5 307 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 SPHK1Q9NYA1 384 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 POLLQ9UGP5 575 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 FAM135BQ49AJ0 1406 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 SBNO1A3KN83 1393 aa6.06□□□□□ -1.44
NUDCD1-204ENST00000521439 TTC41PQ6P2S7 1318 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 ZC3H13Q5T200 1668 aaKnown RBP6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 FANCAO15360 1455 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 TRAV34A0A0B4J273 112 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 C1orf232A0A0U1RR37 186 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 A0A1W2PN81 502 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 FAM172BPA6NC97 362 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 SLC9B1P1A6NJY1 282 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 P2RY10O00398 339 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 SLU7O95391 586 aaKnown RBP6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 UBTFL6P0CB48 400 aaPredicted RBP6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 IGHV4-38-2P0DP08 117 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 SP100P23497 879 aaPredicted RBP6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 CHRNA7P36544 502 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 ALDH3A2P51648 485 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 OTUD4Q01804 1114 aaKnown RBP6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 ZNF415Q09FC8 603 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 HADHQ16836 314 aaKnown RBP6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 WHAMMP3Q1A5X7 153 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 ITPRIPL2Q3MIP1 535 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 UGT3A2Q3SY77 523 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 DCAF10Q5QP82 559 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 CYP4A22Q5TCH4 519 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 ATL3Q6DD88 541 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 SLC27A1Q6PCB7 646 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 C19orf48Q6RUI8 117 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 RBM43Q6ZSC3 357 aaKnown RBP6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 C15orf52Q6ZUT6 534 aaKnown RBP6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 SLC51BQ86UW2 128 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 DNAJC22Q8N4W6 341 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 KLHDC9Q8NEP7 349 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 OR56B2PQ8NGI1 322 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 OLIG1Q8TAK6 271 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 C19orf60Q96EN9 201 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 MSANTD3Q96H12 275 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 CCDC42Q96M95 316 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 RAD9AQ99638 391 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 RHNO1Q9BSD3 238 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 TBCDQ9BTW9 1192 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 THUMPD3Q9BV44 507 aaKnown RBP6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 ACAT2Q9BWD1 397 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 PUS3Q9BZE2 481 aaKnown RBP6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 MMP28Q9H239 520 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 FN3KQ9H479 309 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 AZI2Q9H6S1 392 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 DCTPP1Q9H773 170 aa6.05□□□□□ -1.44
NUDCD1-204ENST00000521439 WWOXQ9NZC7 414 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms