RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 TECRQ9NZ01 308 aaKnown RBP3□□□□□ -1.93
HMGN1P28-201ENST00000521340 MRPS2Q9Y399 296 aaKnown RBP3□□□□□ -1.93
HMGN1P28-201ENST00000521340 CEP164Q9UPV0 1460 aa3□□□□□ -1.93
HMGN1P28-201ENST00000521340 TNIKQ9UKE5 1360 aa3□□□□□ -1.93
HMGN1P28-201ENST00000521340 SH3PXD2BA1X283 911 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 TMEM89A2RUT3 159 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 A8MVM7 634 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 NPIPB9F8W1W9 429 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 BUB3O43684 328 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 EXTL3O43909 919 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 CYTIPO60759 359 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 LRCH4O75427 683 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 PATE4P0C8F1 98 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 PRSS56P0CW18 603 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 CT45A8P0DMV1 189 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 CT45A9P0DMV2 189 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 SNHG28P0DPA3 235 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 ACKR3P25106 362 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 HPDP32754 393 aaPredicted RBP2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 CCL11P51671 97 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 HSD17B7P56937 341 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 DCDC1P59894 354 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 HERV-K104P63124 156 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 SPP2Q13103 211 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 RIGQ13278 110 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 FHL1Q13642 323 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 ITGA9Q13797 1035 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 KARSQ15046 597 aaKnown RBP2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 TRADDQ15628 312 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 CEBPEQ15744 281 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 INAQ16352 499 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 ZNF718Q3SXZ3 478 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 LRRC37A5PQ49AS3 106 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 CT45A2Q5DJT8 189 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 SPANXN4Q5MJ08 99 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 LCN1P1Q5VSP4 162 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 UNC5DQ6UXZ4 953 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 FCRLAQ7L513 359 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 NOTCH2NLQ7Z3S9 236 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 SYVN1Q86TM6 617 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 NLRP14Q86W24 1093 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 CACUL1Q86Y37 369 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 WDR49Q8IV35 697 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 DND1Q8IYX4 353 aaKnown RBP2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 RNF148Q8N7C7 305 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 RNF149Q8NC42 400 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 ADAD2Q8NCV1 583 aaKnown RBP2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 OR5AP2Q8NGF4 316 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 OR4C15Q8NGM1 316 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 ZNRF4Q8WWF5 429 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 TMEM143Q96AN5 459 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 NSL1Q96IY1 281 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 NECTIN4Q96NY8 510 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 S1PR3Q99500 378 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 FSD1Q9BTV5 496 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 LRRC2Q9BYS8 371 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 PANK2Q9BZ23 570 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 NYXQ9GZU5 481 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 CXXC4Q9H2H0 198 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 ECT2Q9H8V3 914 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 SDF2L1Q9HCN8 221 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 ZNF334Q9HCZ1 680 aaPredicted RBP2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 SLC52A3Q9NQ40 469 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 ECHDC1Q9NTX5 307 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 ACOXLQ9NUZ1 547 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 EXOC1Q9NV70 894 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 INTS10Q9NVR2 710 aaKnown RBP2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 HACD3Q9P035 362 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 SLC12A6Q9UHW9 1150 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 POMT2Q9UKY4 750 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 KLHDC2Q9Y2U9 406 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 RNF115Q9Y4L5 304 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 ETV7Q9Y603 341 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 SOGA1O94964 1423 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 NCAPD2Q15021 1401 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 LRRIQ1Q96JM4 1722 aa2.99□□□□□ -1.93
HMGN1P28-201ENST00000521340 ATAD2BQ9ULI0 1458 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 A0A1W2PR80 420 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 CCDC162PA2VCL2 907 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 FAM172BPA6NC97 362 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 F8WDY8 70 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 CHUKO15111 745 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 GRAP2O75791 330 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 EML2O95834 649 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 MT-ATP6P00846 226 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 T-ENOLP0DO92 83 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 SLC2A2P11168 524 aaPredicted RBP2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 KRT5P13647 590 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 ANPEPP15144 967 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 GNB3P16520 340 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 CEBPBP17676 345 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 CHRNA3P32297 505 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 NR0B1P51843 470 aaKnown RBP2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 BACE1P56817 501 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 GNB1P62873 340 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 CNTN1Q12860 1018 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 LCP2Q13094 533 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 DPYSQ14117 519 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 MTF1Q14872 753 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms