RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 SLC5A7Q9GZV3 580 aa3.83□□□□□ -1.8
CTNNA1-222ENST00000520400 RPF1Q9H9Y2 349 aaKnown RBP3.83□□□□□ -1.8
CTNNA1-222ENST00000520400 RNPEPL1Q9HAU8 725 aa3.83□□□□□ -1.8
CTNNA1-222ENST00000520400 FAM212BQ9NTI7 297 aaPredicted RBP3.83□□□□□ -1.8
CTNNA1-222ENST00000520400 DNAJC11Q9NVH1 559 aa3.83□□□□□ -1.8
CTNNA1-222ENST00000520400 TMEM161AQ9NX61 479 aa3.83□□□□□ -1.8
CTNNA1-222ENST00000520400 THAP10Q9P2Z0 257 aaPredicted RBP3.83□□□□□ -1.8
CTNNA1-222ENST00000520400 PLCL2Q9UPR0 1127 aa3.83□□□□□ -1.8
CTNNA1-222ENST00000520400 EXOGQ9Y2C4 368 aaKnown RBP3.83□□□□□ -1.8
CTNNA1-222ENST00000520400 NINLQ9Y2I6 1382 aa3.83□□□□□ -1.8
CTNNA1-222ENST00000520400 VPS8Q8N3P4 1428 aa3.83□□□□□ -1.8
CTNNA1-222ENST00000520400 CASKIN1Q8WXD9 1431 aa3.83□□□□□ -1.8
CTNNA1-222ENST00000520400 SCAF11Q99590 1463 aaKnown RBP3.83□□□□□ -1.8
CTNNA1-222ENST00000520400 FYCO1Q9BQS8 1478 aa3.83□□□□□ -1.8
CTNNA1-222ENST00000520400 TIAM1Q13009 1591 aa3.83□□□□□ -1.8
CTNNA1-222ENST00000520400 VWDEQ8N2E2 1590 aa3.83□□□□□ -1.8
CTNNA1-222ENST00000520400 ITSN2Q9NZM3 1697 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 ABCA9Q8IUA7 1624 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 NWD1Q149M9 1564 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 CCDC18Q5T9S5 1454 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 NEO1Q92859 1461 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 NPHP3Q7Z494 1330 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 IGHV3-20A0A0C4DH32 117 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 CCDC162PA2VCL2 907 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 LRRD1A4D1F6 860 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 A8MU76 341 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 KRTAP16-1A8MUX0 517 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 P2RX6O15547 441 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 CEACAM4O75871 244 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 SBK2P0C263 348 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 MYOGP15173 224 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 B4GALT1P15291 398 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 PRKACGP22612 351 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 KHKP50053 298 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 CLCN4P51793 760 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 UCP2P55851 309 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 BACE1P56817 501 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 SGCGQ13326 291 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 OTUD3Q5T2D3 398 aaPredicted RBP3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 KCTD11Q693B1 232 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 CCDC91Q7Z6B0 441 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 CNTN4Q8IWV2 1026 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 SLC22A15Q8IZD6 547 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 WDSUB1Q8N9V3 476 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 GPR148Q8TDV2 347 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 UBLCP1Q8WVY7 318 aaPredicted RBP3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 LURAP1Q96LR2 239 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 SYT15Q9BQS2 421 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 PITPNM3Q9BZ71 974 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 HOXD1Q9GZZ0 328 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 PILRAQ9UKJ1 303 aa3.82□□□□□ -1.8
CTNNA1-222ENST00000520400 PREX2Q70Z35 1606 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 RNF17Q9BXT8 1623 aaKnown RBP3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 MTUS2Q5JR59 1369 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 SLC1A7O00341 560 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 SURF4O15260 269 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 NXPH2O95156 264 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 NXPH4O95158 308 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 STBD1O95210 358 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 PRKAR1AP10644 381 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 KRT3P12035 628 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 C4BPBP20851 252 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 HLA-FP30511 346 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 OR3A3P47888 321 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 SMSP52788 366 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 EVCP57679 992 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 STX1BP61266 288 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 CALCOCO2Q13137 446 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 MSLNQ13421 630 aaPredicted RBP3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 GRB14Q14449 540 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 NECTIN1Q15223 517 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 MAPK11Q15759 364 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 EPC2Q52LR7 807 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 ZNF789Q5FWF6 425 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 SLC27A4Q6P1M0 643 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 TRIM65Q6PJ69 517 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 KIF6Q6ZMV9 814 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 FRRS1Q6ZNA5 592 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 C15orf52Q6ZUT6 534 aaKnown RBP3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 Q6ZVQ6 151 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 PRSS42Q7Z5A4 293 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 SERPINA12Q8IW75 414 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 SEPT8Q92599 483 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 SNX21Q969T3 373 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 C18orf12Q96KH6 178 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 NSMCE3Q96MG7 304 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 KRT12Q99456 494 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 SYT11Q9BT88 431 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 NTMT1Q9BV86 223 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 IDI2Q9BXS1 227 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 ZNF665Q9H7R5 613 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 IL1RAPQ9NPH3 570 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 PDRG1Q9NUG6 133 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 EXOC1Q9NV70 894 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 SPG21Q9NZD8 308 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 SELENOKQ9Y6D0 94 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 HCFC1P51610 2035 aa3.81□□□□□ -1.8
CTNNA1-222ENST00000520400 ARHGAP5Q13017 1502 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms