RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 MRPL57Q9BQC6 102 aaKnown RBP13.32□□□□□ -0.28
VEGFA-221ENST00000520265 ROGDIQ9GZN7 287 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 AICDAQ9GZX7 198 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 MRPL46Q9H2W6 279 aaKnown RBP13.32□□□□□ -0.28
VEGFA-221ENST00000520265 OR51B5Q9H339 312 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 NOL11Q9H8H0 719 aaKnown RBP13.32□□□□□ -0.28
VEGFA-221ENST00000520265 SEMA4BQ9NPR2 832 aaPredicted RBP13.32□□□□□ -0.28
VEGFA-221ENST00000520265 PRDM9Q9NQV7 894 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 PRTFDC1Q9NRG1 225 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 DOCK10Q96BY6 2186 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 MYOCOSA0A1B0GUC4 107 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 IFNA16P05015 189 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 SMIM10L1P0DMW3 83 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 MYBL2P10244 700 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 TSPAN8P19075 237 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 SERPINB1P30740 379 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 ST13P50502 369 aaKnown RBP13.31□□□□□ -0.28
VEGFA-221ENST00000520265 RPS13P62277 151 aaKnown RBP13.31□□□□□ -0.28
VEGFA-221ENST00000520265 TLR1Q15399 786 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 SGO1Q5FBB7 561 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 LIPJQ5W064 366 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 PLAG1Q6DJT9 500 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 ABHD17CQ6PCB6 329 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 IGFL3Q6UXB1 125 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 QSOX2Q6ZRP7 698 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 PLPP5Q8NEB5 264 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 CATSPER1Q8NEC5 780 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 OR1N1Q8NGS0 311 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 HUS1BQ8NHY5 278 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 ADAMTS18Q8TE60 1221 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 ZNF473Q8WTR7 871 aaKnown RBP13.31□□□□□ -0.28
VEGFA-221ENST00000520265 ISL2Q96A47 359 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 MTFMTQ96DP5 389 aaKnown RBP13.31□□□□□ -0.28
VEGFA-221ENST00000520265 C19orf60Q96EN9 201 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 SMIM10Q96HG1 83 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 NPLQ9BXD5 320 aaPredicted RBP13.31□□□□□ -0.28
VEGFA-221ENST00000520265 MS4A8Q9BY19 250 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 L2HGDHQ9H9P8 463 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 CLK4Q9HAZ1 481 aaKnown RBP13.31□□□□□ -0.28
VEGFA-221ENST00000520265 NECTIN3Q9NQS3 549 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 COPG2Q9UBF2 871 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 FBXW2Q9UKT8 454 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 PCDHGA11Q9Y5H2 935 aa13.31□□□□□ -0.28
VEGFA-221ENST00000520265 COPG1Q9Y678 874 aaKnown RBP13.31□□□□□ -0.28
VEGFA-221ENST00000520265 E2F3O00716 465 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 MYO1DO94832 1006 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 CLDN9O95484 217 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 PYGBP11216 843 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 KRT15P19012 456 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 GNLYP22749 145 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 UQCRFS1P47985 274 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 LIM2P55344 173 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 SLC26A5P58743 744 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 OC90Q02509 493 aaPredicted RBP13.3□□□□□ -0.28
VEGFA-221ENST00000520265 STX4Q12846 297 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 ELOAQ14241 798 aaKnown RBP13.3□□□□□ -0.28
VEGFA-221ENST00000520265 PCBP2Q15366 365 aaKnown RBP eCLIP13.3□□□□□ -0.281e-10■■□□□ 11.4
VEGFA-221ENST00000520265 TMEM35AQ53FP2 167 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 KHDRBS2Q5VWX1 349 aaKnown RBP13.3□□□□□ -0.28
VEGFA-221ENST00000520265 ADGRD1Q6QNK2 874 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 FAM180AQ6UWF9 173 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 Q6ZS92 163 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 RPS27LQ71UM5 84 aaKnown RBP13.3□□□□□ -0.28
VEGFA-221ENST00000520265 SLC5A8Q8N695 610 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 SREK1Q8WXA9 508 aaKnown RBP13.3□□□□□ -0.28
VEGFA-221ENST00000520265 SNRNP40Q96DI7 357 aaKnown RBP13.3□□□□□ -0.28
VEGFA-221ENST00000520265 IMMP1LQ96LU5 166 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 NSUN5Q96P11 429 aaKnown RBP13.3□□□□□ -0.28
VEGFA-221ENST00000520265 LMF1Q96S06 567 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 CSF3RQ99062 836 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 TBCDQ9BTW9 1192 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 SORBS1Q9BX66 1292 aaKnown RBP13.3□□□□□ -0.28
VEGFA-221ENST00000520265 DMRT3Q9NQL9 472 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 ANKRD10Q9NXR5 420 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 STMN3Q9NZ72 180 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.3□□□□□ -0.28
VEGFA-221ENST00000520265 ADGRE2Q9UHX3 823 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 RNF11Q9Y3C5 154 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 MMACHCQ9Y4U1 282 aa13.3□□□□□ -0.28
VEGFA-221ENST00000520265 V9GYY5 206 aaPredicted RBP13.3□□□□□ -0.28
VEGFA-221ENST00000520265 A0A1W2PQ72 361 aa13.29□□□□□ -0.28
VEGFA-221ENST00000520265 STX16-NPEPL1H3BU86 382 aa13.29□□□□□ -0.28
VEGFA-221ENST00000520265 STX16O14662 325 aa13.29□□□□□ -0.28
VEGFA-221ENST00000520265 KLK8O60259 260 aa13.29□□□□□ -0.28
VEGFA-221ENST00000520265 WDPCPO95876 746 aa13.29□□□□□ -0.28
VEGFA-221ENST00000520265 SHBGP04278 402 aa13.29□□□□□ -0.28
VEGFA-221ENST00000520265 CPN2P22792 545 aa13.29□□□□□ -0.28
VEGFA-221ENST00000520265 GCAP28676 217 aa13.29□□□□□ -0.28
VEGFA-221ENST00000520265 CASP2P42575 452 aa13.29□□□□□ -0.28
VEGFA-221ENST00000520265 NEK2P51955 445 aa13.29□□□□□ -0.28
VEGFA-221ENST00000520265 ID2Q02363 134 aa13.29□□□□□ -0.28
VEGFA-221ENST00000520265 IFT88Q13099 833 aa13.29□□□□□ -0.28
VEGFA-221ENST00000520265 ZRSR2Q15696 482 aaKnown RBP13.29□□□□□ -0.28
VEGFA-221ENST00000520265 LAS2Q8IYD9 372 aa13.29□□□□□ -0.28
VEGFA-221ENST00000520265 BEST3Q8N1M1 668 aa13.29□□□□□ -0.28
VEGFA-221ENST00000520265 KIF2BQ8N4N8 673 aa13.29□□□□□ -0.28
VEGFA-221ENST00000520265 ACOT4Q8N9L9 421 aa13.29□□□□□ -0.28
VEGFA-221ENST00000520265 CCDC63Q8NA47 563 aa13.29□□□□□ -0.28
VEGFA-221ENST00000520265 OR52B6Q8NGF0 335 aa13.29□□□□□ -0.28
VEGFA-221ENST00000520265 M1APQ8TC57 530 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms