RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 C9orf16Q9BUW7 83 aa4.34□□□□□ -1.71
PABPC1-212ENST00000519622 CHID1Q9BWS9 393 aa4.34□□□□□ -1.71
PABPC1-212ENST00000519622 APOL5Q9BWW9 433 aa4.34□□□□□ -1.71
PABPC1-212ENST00000519622 NPLQ9BXD5 320 aaPredicted RBP4.34□□□□□ -1.71
PABPC1-212ENST00000519622 TRIM15Q9C019 465 aa4.34□□□□□ -1.71
PABPC1-212ENST00000519622 NAA50Q9GZZ1 169 aaKnown RBP4.34□□□□□ -1.71
PABPC1-212ENST00000519622 GABARAPL1Q9H0R8 117 aa4.34□□□□□ -1.71
PABPC1-212ENST00000519622 TMEM168Q9H0V1 697 aa4.34□□□□□ -1.71
PABPC1-212ENST00000519622 KCNH6Q9H252 994 aa4.34□□□□□ -1.71
PABPC1-212ENST00000519622 SPNS1Q9H2V7 528 aa4.34□□□□□ -1.71
PABPC1-212ENST00000519622 SLC32A1Q9H598 525 aa4.34□□□□□ -1.71
PABPC1-212ENST00000519622 ZDHHC6Q9H6R6 413 aa4.34□□□□□ -1.71
PABPC1-212ENST00000519622 IL23AQ9NPF7 189 aa4.34□□□□□ -1.71
PABPC1-212ENST00000519622 SPHK2Q9NRA0 654 aa4.34□□□□□ -1.71
PABPC1-212ENST00000519622 DCAF13Q9NV06 445 aaKnown RBP4.34□□□□□ -1.71
PABPC1-212ENST00000519622 PAK1IP1Q9NWT1 392 aaPredicted RBP4.34□□□□□ -1.71
PABPC1-212ENST00000519622 C1orf109Q9NX04 203 aa4.34□□□□□ -1.71
PABPC1-212ENST00000519622 STOX2Q9P2F5 926 aaPredicted RBP4.34□□□□□ -1.71
PABPC1-212ENST00000519622 DKK3Q9UBP4 350 aa4.34□□□□□ -1.71
PABPC1-212ENST00000519622 CD84Q9UIB8 345 aa4.34□□□□□ -1.71
PABPC1-212ENST00000519622 MAGEL2Q9UJ55 1249 aa4.34□□□□□ -1.71
PABPC1-212ENST00000519622 MSRAQ9UJ68 235 aa4.34□□□□□ -1.71
PABPC1-212ENST00000519622 LSM7Q9UK45 103 aaKnown RBP4.34□□□□□ -1.71
PABPC1-212ENST00000519622 CDC42EP3Q9UKI2 254 aa4.34□□□□□ -1.71
PABPC1-212ENST00000519622 ZNF490Q9ULM2 529 aaPredicted RBP4.34□□□□□ -1.71
PABPC1-212ENST00000519622 DMTF1Q9Y222 760 aa4.34□□□□□ -1.71
PABPC1-212ENST00000519622 SH3BP1Q9Y3L3 701 aa4.34□□□□□ -1.71
PABPC1-212ENST00000519622 HEMK1Q9Y5R4 338 aaPredicted RBP4.34□□□□□ -1.71
PABPC1-212ENST00000519622 WNT6Q9Y6F9 365 aa4.34□□□□□ -1.71
PABPC1-212ENST00000519622 COMMD3-BMI1R4GMX3 469 aa4.34□□□□□ -1.71
PABPC1-212ENST00000519622 DOCK8Q8NF50 2099 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 LINC01553A4QN01 128 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 PRRT4C9JH25 899 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 E7EQ34 232 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 NEDD8-MDP1E9PL57 170 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 C5orf67F2Z3F1 127 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 H0YAE9 185 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 K7ESM1 405 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 GRM6O15303 877 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 CLOCKO15516 846 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 B4GAT1O43505 415 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 RGS14O43566 566 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 TSPAN6O43657 245 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 KDM1AO60341 852 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 NOBOXO60393 691 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 BRINP1O60477 761 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 TULP3O75386 442 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 AP2A2O94973 939 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 CLDN9O95484 217 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 CXCL14O95715 111 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 CHEK2O96017 543 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 LDLRP01130 860 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 C8GP07360 202 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 RETP07949 1114 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 ZNF888P0CJ79 500 aaPredicted RBP4.33□□□□□ -1.72
PABPC1-212ENST00000519622 RAP2AP10114 183 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 HSPA8P11142 646 aaKnown RBP4.33□□□□□ -1.72
PABPC1-212ENST00000519622 ERGP11308 486 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 CDK4P11802 303 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 FCGR1AP12314 374 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 ATP1B2P14415 290 aaPredicted RBP4.33□□□□□ -1.72
PABPC1-212ENST00000519622 SLC2A4P14672 509 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 ATP6V1B1P15313 513 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 ZNF30P17039 623 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 ZNF8P17098 575 aaPredicted RBP4.33□□□□□ -1.72
PABPC1-212ENST00000519622 PSMA4P25789 261 aaKnown RBP4.33□□□□□ -1.72
PABPC1-212ENST00000519622 DDX6P26196 483 aaKnown RBP eCLIP4.33□□□□□ -1.72
PABPC1-212ENST00000519622 APEX1P27695 318 aaKnown RBP4.33□□□□□ -1.72
PABPC1-212ENST00000519622 PDHA2P29803 388 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 HMOX2P30519 316 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 CSF2RBP32927 897 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 BMPR1AP36894 532 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 DCTP40126 519 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 OPRD1P41143 372 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 BDKRB1P46663 353 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 RPS9P46781 194 aaKnown RBP4.33□□□□□ -1.72
PABPC1-212ENST00000519622 GNPDA1P46926 289 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 YAP1P46937 504 aaKnown RBP4.33□□□□□ -1.72
PABPC1-212ENST00000519622 HLCSP50747 726 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 CDK9P50750 372 aaKnown RBP4.33□□□□□ -1.72
PABPC1-212ENST00000519622 ARSFP54793 590 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 RRADP55042 308 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 NR1H2P55055 460 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 PLIN5Q00G26 463 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 EEF1A2Q05639 463 aaKnown RBP4.33□□□□□ -1.72
PABPC1-212ENST00000519622 CSTF3Q12996 717 aaKnown RBP4.33□□□□□ -1.72
PABPC1-212ENST00000519622 TOP3AQ13472 1001 aaPredicted RBP4.33□□□□□ -1.72
PABPC1-212ENST00000519622 PDE7AQ13946 482 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 KCNC3Q14003 757 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 DOC2AQ14183 400 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 DMC1Q14565 340 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 BCL7AQ4VC05 210 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 SGO1Q5FBB7 561 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 GRHL2Q6ISB3 625 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 NOXRED1Q6NXP6 359 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 BRAT1Q6PJG6 821 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 UNQ6494/PRO21346Q6UXR6 183 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 FAM83HQ6ZRV2 1179 aaPredicted RBP4.33□□□□□ -1.72
PABPC1-212ENST00000519622 CCDC149Q6ZUS6 474 aa4.33□□□□□ -1.72
PABPC1-212ENST00000519622 USP45Q70EL2 814 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms