RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 GPAT3Q53EU6 434 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 SETMARQ53H47 684 aaPredicted RBP13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 KDM4DQ6B0I6 523 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 NADSYN1Q6IA69 706 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 Q8N402 240 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 ASB15Q8WXK1 588 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 TP53INP1Q96A56 240 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 MSANTD3Q96H12 275 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 CDADC1Q9BWV3 514 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 FAM120CQ9NX05 1096 aaKnown RBP13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 OSGIN1Q9UJX0 560 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 WBP4O75554 376 aaKnown RBP13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 PRSS23O95084 383 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 C6orf47O95873 294 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 TGFB1P01137 390 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 DCDC1P59894 354 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 HEPACAMQ14CZ8 416 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 MPPE1Q53F39 396 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 ATAT1Q5SQI0 421 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 BICRALQ6AI39 1079 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 BHLHB9Q6PI77 547 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 LINC00299Q6ZSB3 139 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 GET4Q7L5D6 327 aaPredicted RBP13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 RAB42Q8N4Z0 105 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 CSNK1G1Q9HCP0 422 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 PSORS1C1Q9UIG5 152 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 SSC5DA1L4H1 1573 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 ERP29P30040 261 aaKnown RBP13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 NSG1P42857 185 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 CLCN4P51793 760 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 MANFP55145 182 aaKnown RBP13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 CDC20Q12834 499 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 CLEC12AQ5QGZ9 265 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 IDNKQ5T6J7 187 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 CAPN13Q6MZZ7 669 aaPredicted RBP13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 FAM46DQ8NEK8 389 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 RHBDF1Q96CC6 855 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 RNF121Q9H920 327 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 ZNF282Q9UDV7 671 aaPredicted RBP13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 ERVW-1Q9UQF0 538 aa13.08□□□□□ -0.32
SH3TC1-225ENST00000515682 SIPA1L1O43166 1804 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 COL11A2P13942 1736 aaPredicted RBP13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 INMT-MINDY4F8WBC2 141 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 ARHGAP33O14559 1287 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 HOXD8P13378 290 aaPredicted RBP13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 DDX5P17844 614 aaKnown RBP13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 CST5P28325 142 aaPredicted RBP13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 FADDQ13158 208 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 E2F2Q14209 437 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 MRPL10Q7Z7H8 261 aaKnown RBP13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 HMGN2P46Q86SG4 172 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 RNF130Q86XS8 419 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 VWA5B2Q8N398 1253 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 PCNPQ8WW12 178 aaKnown RBP13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 GEMIN6Q8WXD5 167 aaKnown RBP13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 TMEM80Q96HE8 168 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 ZSCAN5AQ9BUG6 496 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 TSSK6Q9BXA6 273 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 ACTL8Q9H568 366 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 ELAC1Q9H777 363 aaKnown RBP13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 GULP1Q9UBP9 304 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 SESN1Q9Y6P5 492 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 HMX3A6NHT5 357 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 SOD2P04179 222 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 PIK3CBP42338 1070 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 MAPK8P45983 427 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 HTR3AP46098 478 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 NFATC2Q13469 925 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 MARCH9Q86YJ5 346 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 YIPF7Q8N8F6 280 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 TEFMQ96QE5 360 aaKnown RBP13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 MAPKAP1Q9BPZ7 522 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 MND1Q9BWT6 205 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 SLA2Q9H6Q3 261 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 PTX3P26022 381 aaPredicted RBP13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 SLC19A1P41440 591 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 HSPB3Q12988 150 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 GPM6BQ13491 265 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 LYPLAL1Q5VWZ2 237 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 RFPL4BQ6ZWI9 263 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 PHC2Q8IXK0 858 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 TEX47Q8TBZ9 253 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 CCDC120Q96HB5 630 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 C12orf4Q9NQ89 552 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 PCDHB11Q9Y5F2 797 aa13.07□□□□□ -0.32
SH3TC1-225ENST00000515682 SMLR1H3BR10 107 aa13.06□□□□□ -0.32
SH3TC1-225ENST00000515682 J3KTA2 159 aa13.06□□□□□ -0.32
SH3TC1-225ENST00000515682 CH25HO95992 272 aa13.06□□□□□ -0.32
SH3TC1-225ENST00000515682 KLHDC9Q8NEP7 349 aa13.06□□□□□ -0.32
SH3TC1-225ENST00000515682 ATP6V1C2Q8NEY4 427 aa13.06□□□□□ -0.32
SH3TC1-225ENST00000515682 ZNF431Q8TF32 576 aaPredicted RBP13.06□□□□□ -0.32
SH3TC1-225ENST00000515682 SIPA1Q96FS4 1042 aa13.06□□□□□ -0.32
SH3TC1-225ENST00000515682 ZFP3Q96NJ6 502 aa13.06□□□□□ -0.32
SH3TC1-225ENST00000515682 MRPL39Q9NYK5 338 aaKnown RBP13.06□□□□□ -0.32
SH3TC1-225ENST00000515682 FER1L6Q2WGJ9 1857 aa13.06□□□□□ -0.32
SH3TC1-225ENST00000515682 TGM4P49221 684 aa13.06□□□□□ -0.32
SH3TC1-225ENST00000515682 CAV3P56539 151 aa13.06□□□□□ -0.32
SH3TC1-225ENST00000515682 PTGES3Q15185 160 aaKnown RBP13.06□□□□□ -0.32
SH3TC1-225ENST00000515682 CLLU1OSQ5K130 101 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms