RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 NEUROG3Q9Y4Z2 214 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 B3GALT1Q9Y5Z6 326 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 IGLV3-12A0A075B6K2 115 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 BLACEA4D250 179 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 PMS2P1A4D2B8 440 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 FAM149AA5PLN7 773 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 B3GALT2O43825 422 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 DIAPH2O60879 1101 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 PEX11AO75192 247 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 GUCY1B2O75343 617 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 EEDO75530 441 aaKnown RBP11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 MYO1DO94832 1006 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 TNFSF15O95150 251 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 DLGAP3O95886 979 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 STATHP02808 62 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 PIM1P11309 404 aaPredicted RBP11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 ITGAXP20702 1163 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 SSR2P43308 183 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 ARFIP2P53365 341 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 MAPK10P53779 464 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 C21orf58P58505 322 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 RAB8AP61006 207 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 GABREP78334 506 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 BTN3A2P78410 334 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 ABHD18Q0P651 414 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 GSTA3Q16772 222 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 LSM12Q3MHD2 195 aaKnown RBP11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 DEFB134Q4QY38 66 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 IKBIPQ70UQ0 350 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 CLNKQ7Z7G1 428 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 DSELQ8IZU8 1212 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 PIP4P2Q8N4L2 257 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 SLC38A9Q8NBW4 561 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 ZCCHC10Q8TBK6 192 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 C10orf82Q8WW14 230 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 PMEPA1Q969W9 287 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 FKBP10Q96AY3 582 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 ZNF764Q96H86 408 aaPredicted RBP11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 OR52B2Q96RD2 323 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 CCT8L2Q96SF2 557 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 EBF4Q9BQW3 602 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 SCNM1Q9BWG6 230 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 TMEM120AQ9BXJ8 343 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 BRINP2Q9C0B6 783 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 SLC26A1Q9H2B4 701 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 COPS7BQ9H9Q2 264 aaPredicted RBP11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 MYNNQ9NPC7 610 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 ASCL3Q9NQ33 180 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 TXLNGQ9NUQ3 528 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 TMEM45AQ9NWC5 275 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 MS4A12Q9NXJ0 267 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 KCMF1Q9P0J7 381 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 PHF11Q9UIL8 331 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 DCTN4Q9UJW0 460 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 DAPP1Q9UN19 280 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 LHX6Q9UPM6 363 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 EIF3LQ9Y262 564 aaKnown RBP11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 MAP4K5Q9Y4K4 846 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 ASB4Q9Y574 426 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 IGF2RP11717 2491 aa11.34□□□□□ -0.59
PDLIM5-220ENST00000514830 A0A0A6YYC8 382 aaPredicted RBP11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 A0A0G2JND7 137 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 I3L1I5 382 aaPredicted RBP11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 MEN1O00255 615 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 SAP18O00422 153 aaKnown RBP11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 RTCAO00442 366 aaKnown RBP11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 PCDH7O60245 1069 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 PRMT3O60678 531 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 STK17BO94768 372 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 KIAA0754O94854 1291 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 ALBP02768 609 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 CYC1P08574 325 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 CD63P08962 238 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 BCKDHAP12694 445 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 IDO1P14902 403 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 ZNF28P17035 718 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 IL1RNP18510 177 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 SDC1P18827 310 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 CERS1P27544 350 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 RBMS1P29558 406 aaKnown RBP11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 ASMTP46597 345 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 ATP4BP51164 291 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 RPL38P63173 70 aaKnown RBP11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 ZNF763Q0D2J5 394 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 SLC9A5Q14940 896 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 GALNTL6Q49A17 601 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 CCNYL2Q5T2Q4 361 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 PRAMEF17Q5VTA0 474 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 PRSS41Q7RTY9 318 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 ANKS4BQ8N8V4 417 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 AMER3Q8N944 861 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 FNDC5Q8NAU1 212 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 OR9A4Q8NGU2 314 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 NXPE2Q96DL1 559 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 CLIP3Q96DZ5 547 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 OR1F2PQ96R84 312 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 CTRCQ99895 268 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 ULBP3Q9BZM4 244 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 TGIF2Q9GZN2 237 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 ZNF304Q9HCX3 659 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms