RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 SNX31Q8N9S9 440 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 AGR3Q8TD06 166 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 TSPEARQ8WU66 669 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 STARD8Q92502 1023 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 EXT2Q93063 718 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 COL26A1Q96A83 441 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 C19orf60Q96EN9 201 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 MVB12AQ96EY5 273 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 NSUN5Q96P11 429 aaKnown RBP7.9□□□□□ -1.14
CCL28-204ENST00000514421 CATSPER2Q96P56 530 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 PITHD1Q9GZP4 211 aaPredicted RBP7.9□□□□□ -1.14
CCL28-204ENST00000514421 TUBB1Q9H4B7 451 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 EHD1Q9H4M9 534 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 ACTL8Q9H568 366 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 NT5DC2Q9H857 520 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 SYNPO2LQ9H987 977 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 ZNF304Q9HCX3 659 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 MID1IP1Q9NPA3 183 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 SLC22A11Q9NSA0 550 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 OPTCQ9UBM4 332 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 TCFL5Q9UL49 500 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 RUVBL1Q9Y265 456 aaKnown RBP7.9□□□□□ -1.14
CCL28-204ENST00000514421 MRPS18BQ9Y676 258 aaKnown RBP7.9□□□□□ -1.14
CCL28-204ENST00000514421 FAM208BQ5VWN6 2430 aa7.9□□□□□ -1.15
CCL28-204ENST00000514421 A0A1B0GTL3 188 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 URADA6NGE7 173 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 A8MUI8 341 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 PPP6CO00743 305 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 P2RX6O15547 441 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 FOXS1O43638 330 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 KLF7O75840 302 aaPredicted RBP7.89□□□□□ -1.15
CCL28-204ENST00000514421 MED26O95402 600 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 ITGB2P05107 769 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 SERPIND1P05546 499 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 EPB42P16452 691 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 ITGAXP20702 1163 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 AVPR1BP47901 424 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 AGTR2P50052 363 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 CDH13P55290 713 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 REEP5Q00765 189 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 MEF2AQ02078 507 aaPredicted RBP7.89□□□□□ -1.15
CCL28-204ENST00000514421 IRF8Q02556 426 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 OCA2Q04671 838 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 RGS1Q08116 209 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 CHIT1Q13231 466 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 LAPTM5Q13571 262 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 CYLC2Q14093 348 aaPredicted RBP7.89□□□□□ -1.15
CCL28-204ENST00000514421 DOC2AQ14183 400 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 SLC9A5Q14940 896 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 NCF4Q15080 339 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 TBR1Q16650 682 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 GSTA3Q16772 222 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 UGT8Q16880 541 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 SMU1Q2TAY7 513 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 XKR6Q5GH73 641 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 PAGE2BQ5JRK9 111 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 TMEM198Q66K66 360 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 C8orf82Q6P1X6 216 aaPredicted RBP7.89□□□□□ -1.15
CCL28-204ENST00000514421 FAM198BQ6UWH4 519 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 TMIGD1Q6UXZ0 262 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 HACD2Q6Y1H2 254 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 TMPRSS11BQ86T26 416 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 SCUBE1Q8IWY4 988 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 ULK2Q8IYT8 1036 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 ARHGEF39Q8N4T4 335 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 LSM14AQ8ND56 463 aaKnown RBP7.89□□□□□ -1.15
CCL28-204ENST00000514421 ZNF740Q8NDX6 193 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 TRPV3Q8NET8 790 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 TTLQ8NG68 377 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 TWIST2Q8WVJ9 160 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 THAP4Q8WY91 577 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 MCUR1Q96AQ8 359 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 FKBP10Q96AY3 582 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 WDR34Q96EX3 536 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 WBP1Q96G27 269 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 C10orf90Q96M02 699 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 C3orf30Q96M34 536 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 MACROD1Q9BQ69 325 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 EFCAB11Q9BUY7 163 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 NTMT1Q9BV86 223 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 SHCBP1LQ9BZQ2 653 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 SLC26A1Q9H2B4 701 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 SPNS1Q9H2V7 528 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 DCLRE1BQ9H816 532 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 RNPEPL1Q9HAU8 725 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 PFDN4Q9NQP4 134 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 GEMIN8Q9NWZ8 242 aaKnown RBP7.89□□□□□ -1.15
CCL28-204ENST00000514421 NDE1Q9NXR1 346 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 SLC7A8Q9UHI5 535 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 ZNF490Q9ULM2 529 aaPredicted RBP7.89□□□□□ -1.15
CCL28-204ENST00000514421 PRPF19Q9UMS4 504 aaKnown RBP7.89□□□□□ -1.15
CCL28-204ENST00000514421 PADI2Q9Y2J8 665 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 PTRH2Q9Y3E5 179 aaKnown RBP7.89□□□□□ -1.15
CCL28-204ENST00000514421 ANGPTL3Q9Y5C1 460 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 SLC22A7Q9Y694 548 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 MAU2Q9Y6X3 613 aa7.89□□□□□ -1.15
CCL28-204ENST00000514421 KMT2BQ9UMN6 2715 aaPredicted RBP7.88□□□□□ -1.15
CCL28-204ENST00000514421 MGAQ8IWI9 3026 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 SPTA1P02549 2419 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 A0A0A6YYC8 382 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms