RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 C4orf51C9J302 202 aa18.84■□□□□ 0.61
SQSTM1-215ENST00000514093 TGFBR3LH3BV60 316 aa18.84■□□□□ 0.61
SQSTM1-215ENST00000514093 SYT5O00445 386 aa18.84■□□□□ 0.61
SQSTM1-215ENST00000514093 ATE1O95260 518 aa18.84■□□□□ 0.61
SQSTM1-215ENST00000514093 INHBBP09529 407 aa18.84■□□□□ 0.61
SQSTM1-215ENST00000514093 CCND1P24385 295 aa18.84■□□□□ 0.61
SQSTM1-215ENST00000514093 MAN2A2P49641 1150 aa18.84■□□□□ 0.61
SQSTM1-215ENST00000514093 KEAP1Q14145 624 aa18.84■□□□□ 0.61
SQSTM1-215ENST00000514093 PHKG1Q16816 387 aa18.84■□□□□ 0.61
SQSTM1-215ENST00000514093 FLYWCH1Q4VC44 716 aa18.84■□□□□ 0.61
SQSTM1-215ENST00000514093 NDUFAF5Q5TEU4 345 aa18.84■□□□□ 0.61
SQSTM1-215ENST00000514093 NIPAL1Q6NVV3 410 aa18.84■□□□□ 0.61
SQSTM1-215ENST00000514093 CHSY3Q70JA7 882 aa18.84■□□□□ 0.61
SQSTM1-215ENST00000514093 GSTA5Q7RTV2 222 aa18.84■□□□□ 0.61
SQSTM1-215ENST00000514093 PRIMA1Q86XR5 153 aa18.84■□□□□ 0.61
SQSTM1-215ENST00000514093 FAM109AQ8N4B1 249 aa18.84■□□□□ 0.61
SQSTM1-215ENST00000514093 ZNF669Q96BR6 464 aaPredicted RBP18.84■□□□□ 0.61
SQSTM1-215ENST00000514093 HAUS8Q9BT25 410 aa18.84■□□□□ 0.61
SQSTM1-215ENST00000514093 ZFP69BQ9UJL9 534 aa18.84■□□□□ 0.61
SQSTM1-215ENST00000514093 CAPN6Q9Y6Q1 641 aa18.84■□□□□ 0.61
SQSTM1-215ENST00000514093 NSD1Q96L73 2696 aaPredicted RBP18.83■□□□□ 0.61
SQSTM1-215ENST00000514093 EML6Q6ZMW3 1958 aa18.83■□□□□ 0.61
SQSTM1-215ENST00000514093 AQP7O14520 342 aa18.83■□□□□ 0.6
SQSTM1-215ENST00000514093 WDR1O75083 606 aa18.83■□□□□ 0.6
SQSTM1-215ENST00000514093 HAUS5O94927 633 aa18.83■□□□□ 0.6
SQSTM1-215ENST00000514093 CNR1P21554 472 aa18.83■□□□□ 0.6
SQSTM1-215ENST00000514093 SLC1A2P43004 574 aa18.83■□□□□ 0.6
SQSTM1-215ENST00000514093 SCTRP47872 440 aa18.83■□□□□ 0.6
SQSTM1-215ENST00000514093 KCNJ1P48048 391 aa18.83■□□□□ 0.6
SQSTM1-215ENST00000514093 DNASE1L1P49184 302 aa18.83■□□□□ 0.6
SQSTM1-215ENST00000514093 SIX1Q15475 284 aaPredicted RBP18.83■□□□□ 0.6
SQSTM1-215ENST00000514093 WLSQ5T9L3 541 aa18.83■□□□□ 0.6
SQSTM1-215ENST00000514093 FBXW10Q5XX13 1052 aa18.83■□□□□ 0.6
SQSTM1-215ENST00000514093 GK5Q6ZS86 529 aa18.83■□□□□ 0.6
SQSTM1-215ENST00000514093 GPALPP1Q8IXQ4 340 aa18.83■□□□□ 0.6
SQSTM1-215ENST00000514093 ANKRD53Q8N9V6 530 aa18.83■□□□□ 0.6
SQSTM1-215ENST00000514093 RASL10BQ96S79 203 aa18.83■□□□□ 0.6
SQSTM1-215ENST00000514093 FAM173AQ9BQD7 235 aa18.83■□□□□ 0.6
SQSTM1-215ENST00000514093 EXO5Q9H790 373 aa18.83■□□□□ 0.6
SQSTM1-215ENST00000514093 IL1RL2Q9HB29 575 aa18.83■□□□□ 0.6
SQSTM1-215ENST00000514093 SEMA4BQ9NPR2 832 aaPredicted RBP18.83■□□□□ 0.6
SQSTM1-215ENST00000514093 TRMT1Q9NXH9 659 aaKnown RBP18.83■□□□□ 0.6
SQSTM1-215ENST00000514093 SAMD15Q9P1V8 674 aa18.83■□□□□ 0.6
SQSTM1-215ENST00000514093 MYOTQ9UBF9 498 aa18.83■□□□□ 0.6
SQSTM1-215ENST00000514093 PPIEQ9UNP9 301 aaKnown RBP18.83■□□□□ 0.6
SQSTM1-215ENST00000514093 MYOCOSA0A1B0GUC4 107 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 C8GP07360 202 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 SMIM10L1P0DMW3 83 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 TPSB2P20231 275 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 HOXC12P31275 282 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 KIF5AQ12840 1032 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 SLC10A1Q14973 349 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 TERF2Q15554 542 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 TPSAB1Q15661 275 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 CCNG2Q16589 344 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 RIPPLY2Q5TAB7 128 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 FAM47EQ6ZV65 393 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 PALM2Q8IXS6 379 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 TBC1D19Q8N5T2 526 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 RELL2Q8NC24 303 aaPredicted RBP18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 TMEM52Q8NDY8 209 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 FAM222BQ8WU58 562 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 ARSGQ96EG1 525 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 SMIM10Q96HG1 83 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 SCYL1Q96KG9 808 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 NDNQ99608 321 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 AARSD1Q9BTE6 412 aaKnown RBP18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 AICDAQ9GZX7 198 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 TSPY26PQ9H489 355 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 TUBA8Q9NY65 449 aaPredicted RBP18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 SPRR3Q9UBC9 169 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 TRMT6Q9UJA5 497 aaKnown RBP18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 MMACHCQ9Y4U1 282 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 CLDN16Q9Y5I7 305 aa18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 FN1P02751 2386 aaKnown RBP18.82■□□□□ 0.6
SQSTM1-215ENST00000514093 A0A0G2JN53 185 aa18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 EIF3FO00303 357 aaPredicted RBP18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 ENDOUP21128 410 aaKnown RBP18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 BMP5P22003 454 aa18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 HNRNPFP52597 415 aaKnown RBP18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 BTN3A2P78410 334 aa18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 TIAL1Q01085 375 aaKnown RBP eCLIP18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 DHX9Q08211 1270 aaKnown RBP18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 BMPR2Q13873 1038 aa18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 CSHL1Q14406 222 aa18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 TRIP13Q15645 432 aaPredicted RBP18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 TOR1AIP1Q5JTV8 583 aa18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 C4orf22Q6V702 233 aa18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 SEM1Q6ZVN7 128 aa18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 STRA8Q7Z7C7 330 aa18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 CAND1Q86VP6 1230 aaKnown RBP18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 SCUBE1Q8IWY4 988 aa18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 NEIL2Q969S2 332 aa18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 SARAFQ96BY9 339 aa18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 TSNARE1Q96NA8 513 aa18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 DESI2Q9BSY9 194 aa18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 CLK4Q9HAZ1 481 aaKnown RBP18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 PRTFDC1Q9NRG1 225 aa18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 B4GALT7Q9UBV7 327 aa18.81■□□□□ 0.6
SQSTM1-215ENST00000514093 JMJD1CQ15652 2540 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms