RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 TRMOQ9BU70 441 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 ZNF717Q9BY31 904 aaPredicted RBP9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 ACPTQ9BZG2 426 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 TUBB1Q9H4B7 451 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 MARCOQ9UEW3 520 aaPredicted RBP9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 GIMAP2Q9UG22 337 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 ZDHHC2Q9UIJ5 367 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 SLC22A7Q9Y694 548 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 SCN2AQ99250 2005 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 ANKRD11Q6UB99 2663 aaPredicted RBP9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 URADA6NGE7 173 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 SRRM3A6NNA2 597 aaPredicted RBP9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 TMEM114B3SHH9 223 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 FAM227AF5H4B4 570 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 H0YIG0 161 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 MASP2O00187 686 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 FOXE1O00358 373 aaPredicted RBP9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 PIP5K1BO14986 540 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 NKX2-8O15522 239 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 CHST10O43529 356 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 TMPRSS11DO60235 418 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 KLF7O75840 302 aaPredicted RBP9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 UMODP07911 640 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 FURINP09958 794 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 ATP5A1P25705 553 aaKnown RBP9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 SERPINB1P30740 379 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 OTX2P32243 289 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 HNRNPFP52597 415 aaKnown RBP9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 SLC18A1P54219 525 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 RUNX2Q13950 521 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 PDCD2Q16342 344 aaPredicted RBP9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 IMPG1Q17R60 797 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 MINDY4Q4G0A6 757 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 HSP90B2PQ58FF3 399 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 FAAH2Q6GMR7 532 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 C19orf48Q6RUI8 117 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 LRRC69Q6ZNQ3 347 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 CHSY3Q70JA7 882 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 OVCH1Q7RTY7 1134 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 LAPTM4BQ86VI4 370 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 DDIASQ8IXT1 998 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 C1orf52Q8N6N3 182 aaKnown RBP9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 TMEM52Q8NDY8 209 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 OR2T11Q8NH01 316 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 DYDC1Q8WWB3 177 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 FKBP10Q96AY3 582 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 MVB12AQ96EY5 273 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 APIPQ96GX9 242 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 SEC16BQ96JE7 1060 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 MAGEB10Q96LZ2 347 aaPredicted RBP9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 KCNC2Q96PR1 638 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 CCNL2Q96S94 520 aaPredicted RBP9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 SERPINI1Q99574 410 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 DPH2Q9BQC3 489 aaPredicted RBP9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 EBPLQ9BY08 206 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 PRDM7Q9NQW5 492 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 PNPOQ9NVS9 261 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 FBXW2Q9UKT8 454 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 TCFL5Q9UL49 500 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 CDC14AQ9UNH5 594 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 FARSAQ9Y285 508 aaKnown RBP9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 DSPP15924 2871 aaKnown RBP9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 USP24Q9UPU5 2620 aa9.26□□□□□ -0.93
TOPBP1-209ENST00000513818 A0A087WV48 116 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 MYOCOSA0A1B0GUC4 107 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 CDC14CA4D256 554 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 C21orf140B9A014 251 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 B3GALT2O43825 422 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 B4GALT2O60909 372 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 ALOX12BO75342 701 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 ULK1O75385 1050 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 KLK1P06870 262 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 RAB40ALP0C0E4 278 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 ZGLP1P0C6A0 271 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 LINC00032P0C843 101 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 KITP10721 976 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 UROSP10746 265 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 HIST1H1TP22492 207 aaPredicted RBP9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 PTX3P26022 381 aaPredicted RBP9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 PTPN4P29074 926 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 BSGP35613 385 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 FOLR3P41439 243 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 MTTPP55157 894 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 HNRNPH2P55795 449 aaKnown RBP9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 PRSS12P56730 875 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 NAA20P61599 178 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 RPS15P62841 145 aaKnown RBP9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 CXADRP78310 365 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 OCA2Q04671 838 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 EEF1A2Q05639 463 aaKnown RBP9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 KLC1Q07866 573 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 TGM3Q08188 693 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 GALNT1Q10472 559 aaPredicted RBP9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 TBL3Q12788 808 aaKnown RBP9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 CSTF3Q12996 717 aaKnown RBP9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 AP5B1Q2VPB7 878 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 TMEM35AQ53FP2 167 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 OR4C11Q6IEV9 310 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 COMMD6Q7Z4G1 85 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 NUDT13Q86X67 352 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms