RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 RAB38P57729 211 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 HSF1Q00613 529 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 RUNX2Q13950 521 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 ADPRMQ3LIE5 342 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 CDKL4Q5MAI5 379 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 TRIM40Q6P9F5 258 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 CAPN12Q6ZSI9 719 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 CHERPQ8IWX8 916 aaKnown RBP13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 CYP4Z2PQ8N1L4 340 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 TMEM156Q8N614 296 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 BBOF1Q8ND07 529 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 OR2L5Q8NG80 312 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 AGAP11Q8TF27 550 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 PHF10Q8WUB8 498 aaKnown RBP13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 CDKL2Q92772 493 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 TSPAN17Q96FV3 270 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 TMEM79Q9BSE2 394 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 REXO4Q9GZR2 422 aaKnown RBP13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 GRPEL1Q9HAV7 217 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 PRTFDC1Q9NRG1 225 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 PNO1Q9NRX1 252 aaKnown RBP13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 DNAJC11Q9NVH1 559 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 WWOXQ9NZC7 414 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 TXNDC16Q9P2K2 825 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 FBXW2Q9UKT8 454 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 SNX24Q9Y343 169 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 ASB1Q9Y576 335 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 CLDN16Q9Y5I7 305 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 OTOGQ6ZRI0 2925 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 ADGRG4Q8IZF6 3080 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 GTF3C1Q12789 2109 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 E9PLN8 166 aa13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 TFECO14948 347 aaPredicted RBP13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 SNRPB2P08579 225 aaKnown RBP13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 GGT5P36269 586 aa13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 PLA2G16P53816 162 aa13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 SLC13A2Q13183 592 aa13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 RCN2Q14257 317 aa13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 DOLPP1Q86YN1 238 aa13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 SULF2Q8IWU5 870 aa13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 ZNF595Q8IYB9 648 aa13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 FAM47BQ8NA70 645 aa13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 TMEM52Q8NDY8 209 aa13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 PYROXD1Q8WU10 500 aa13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 MTFMTQ96DP5 389 aaKnown RBP13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 PTCD3Q96EY7 689 aaKnown RBP13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 QRFPRQ96P65 431 aa13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 PHF12Q96QT6 1004 aa13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 SERINC2Q96SA4 455 aa13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 KRT12Q99456 494 aa13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 VKORC1Q9BQB6 163 aa13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 CCDC77Q9BR77 488 aa13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 COPS7BQ9H9Q2 264 aaPredicted RBP13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 CAB39LQ9H9S4 337 aa13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 ADAP2Q9NPF8 381 aa13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 SMYD2Q9NRG4 433 aa13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 RNF14Q9UBS8 474 aa13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 ZNF223Q9UK11 482 aaPredicted RBP13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 MTO1Q9Y2Z2 717 aaKnown RBP13.71□□□□□ -0.21
CCHCR1-229ENST00000512418 CACNA1CQ13936 2221 aa13.71□□□□□ -0.22
CCHCR1-229ENST00000512418 DCHS2Q6V1P9 2916 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 TGFBR3LH3BV60 316 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 CLGNO14967 610 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 PEX1O43933 1283 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 PIAS1O75925 651 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 TBX6O95947 436 aaPredicted RBP13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 CCDC166P0CW27 439 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 STMN1P16949 149 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 PPP2R1BP30154 601 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 PTGER1P34995 402 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 SSR4P51571 173 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 GPR143P51810 404 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 HNRNPFP52597 415 aaKnown RBP13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 MTTPP55157 894 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 ATP6V0D1P61421 351 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 TGM3Q08188 693 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 CDSNQ15517 529 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 ELAVL1Q15717 326 aaKnown RBP13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 SULT1C3Q6IMI6 304 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 NCCRP1Q6ZVX7 275 aaPredicted RBP13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 VN1R5Q7Z5H4 357 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 FGD2Q7Z6J4 655 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 GPSM1Q86YR5 675 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 SPATA6LQ8N4H0 392 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 PDPRQ8NCN5 879 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 C16orf52Q8NHV5 167 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 NCLNQ969V3 563 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 WDR34Q96EX3 536 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 DMRTA2Q96SC8 542 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 GPR22Q99680 433 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 EFCAB11Q9BUY7 163 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 TRIM8Q9BZR9 551 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 DAPP1Q9UN19 280 aa13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 YARS2Q9Y2Z4 477 aaKnown RBP13.7□□□□□ -0.22
CCHCR1-229ENST00000512418 CXorf49A8MYA2 514 aaPredicted RBP13.69□□□□□ -0.22
CCHCR1-229ENST00000512418 CYR61O00622 381 aa13.69□□□□□ -0.22
CCHCR1-229ENST00000512418 ADAM10O14672 748 aa13.69□□□□□ -0.22
CCHCR1-229ENST00000512418 EIF3HO15372 352 aaKnown RBP eCLIP13.69□□□□□ -0.226e-6■■■■□ 25.8
CCHCR1-229ENST00000512418 TAPBPO15533 448 aa13.69□□□□□ -0.22
CCHCR1-229ENST00000512418 PHGDHO43175 533 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms